Cow genome map


           Conread name:
           rpfco0103_n16.y1
        

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-169
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               1-171
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 168
               

               Conread position:
               1-192
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               152, 44
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               160, 54
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               179, 0
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               160, 90
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               160, 174
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               160, 93
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               160, 115
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               183, 60
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               168, 213
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               2-155
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               2-208
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               163, 203
               

               Conread position:
               2-213
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               161, 32
               

               Conread position:
               3-164
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               33, 29
               

               Conread position:
               3-207
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               56, 91
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 169
               

               Conread position:
               4-207
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 91
               

               Conread position:
               5-216
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               165, 95
               

               Conread position:
               6-164
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               7-187
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               10-158
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               10-203
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               15-215
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               146, 76
               

               Conread position:
               16-224
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               145, 193
               

               Conread position:
               20-207
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               25-182
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               26-203
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               26-203
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               35-164
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               35-215
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               57-210
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               64-215
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.