Cow genome map
| Conread name: | rpfco0103_n16.y1 | 
| Conread position: | 1-150 | 
| Cow position: | chr3:76188352-76188501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 90, 69 | 
| Conread position: | 1-155 | 
| Cow position: | chr3:37982462-37982308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-159 | 
| Cow position: | chr3:63688104-63687947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 93, 0 | 
| Conread position: | 1-162 | 
| Cow position: | chr3:27544676-27544510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 64, 41 | 
| Conread position: | 1-164 | 
| Cow position: | chr3:3553206-3553369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-164 | 
| Cow position: | chr3:38346861-38347022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 1-167 | 
| Cow position: | chr3:65019990-65020158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 1-167 | 
| Cow position: | chr3:80071775-80071940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 1-171 | 
| Cow position: | chr3:11254494-11254322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 86, 106 | 
| Conread position: | 1-178 | 
| Cow position: | chr3:20843743-20843562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 164, 0 | 
| Conread position: | 1-192 | 
| Cow position: | chr3:597947-598138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-198 | 
| Cow position: | chr3:14552537-14552733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 1-199 | 
| Cow position: | chr3:42461358-42461556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-201 | 
| Cow position: | chr3:5851269-5851066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 142, 90 | 
| Conread position: | 1-202 | 
| Cow position: | chr3:70450005-70450210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 160, 0 | 
| Conread position: | 1-203 | 
| Cow position: | chr3:50768333-50768542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 30, 94 | 
| Conread position: | 1-203 | 
| Cow position: | chr3:59179067-59179269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 158, 15 | 
| Conread position: | 1-203 | 
| Cow position: | chr3:69849844-69849646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 156, 0 | 
| Conread position: | 1-204 | 
| Cow position: | chr3:57022236-57022431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 1-206 | 
| Cow position: | chr3:209980-210179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 88, 155 | 
| Conread position: | 1-206 | 
| Cow position: | chr3:16547334-16547542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 160, 0 | 
| Conread position: | 1-206 | 
| Cow position: | chr3:20129605-20129805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 84, 24 | 
| Conread position: | 1-206 | 
| Cow position: | chr3:35852811-35852602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 62, 92 | 
| Conread position: | 1-206 | 
| Cow position: | chr3:59001087-59000885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 1-206 | 
| Cow position: | chr3:72018781-72018978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 1-206 | 
| Cow position: | chr3:76091946-76092150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 158, 62 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:15662040-15661839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 88, 44 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:22872394-22872188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:28675647-28675852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 202, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:34953312-34953522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 149, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:40827512-40827721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 160, 206 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:41818430-41818228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:43528579-43528373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:54808817-54809022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 202, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:56582505-56582706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:65989731-65989941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 15, 207 | 
| Conread position: | 1-207 | 
| Cow position: | chr3:66738431-66738641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 146, 93 | 
| Conread position: | 1-208 | 
| Cow position: | chr3:4135160-4134950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 164, 204 | 
| Conread position: | 1-208 | 
| Cow position: | chr3:33698383-33698590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 160, 42 | 
| Conread position: | 1-208 | 
| Cow position: | chr3:64875477-64875269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 160, 53 | 
| Conread position: | 1-208 | 
| Cow position: | chr3:70731126-70731336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 153, 204 | 
| Conread position: | 1-209 | 
| Cow position: | chr3:16752589-16752387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 90, 0 | 
| Conread position: | 1-210 | 
| Cow position: | chr3:29807121-29807332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 156, 54 | 
| Conread position: | 1-210 | 
| Cow position: | chr3:37599758-37599551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 206, 186 | 
| Conread position: | 1-211 | 
| Cow position: | chr3:50329417-50329207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-211 | 
| Cow position: | chr3:70566080-70565870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-213 | 
| Cow position: | chr3:13353018-13353232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 160, 82 | 
| Conread position: | 1-214 | 
| Cow position: | chr3:28597207-28596996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 149, 42 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:2007932-2008136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:2674687-2674899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 203, 186 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:4461830-4461620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:11640095-11640303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 26, 34 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:22908173-22907960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 153, 44 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:45881567-45881780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 204, 0 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:58383620-58383839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 52, 210 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:79292493-79292701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 1-215 | 
| Cow position: | chr3:80581334-80581535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 1-216 | 
| Cow position: | chr3:55733601-55733814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 88, 0 | 
| Conread position: | 1-216 | 
| Cow position: | chr3:77188107-77188310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 1-227 | 
| Cow position: | chr3:6853845-6853622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 51, 93 | 
| Conread position: | 2-159 | 
| Cow position: | chr3:17331428-17331584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 2-203 | 
| Cow position: | chr3:20802969-20802770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 2-207 | 
| Cow position: | chr3:59691563-59691762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 154, 0 | 
| Conread position: | 2-212 | 
| Cow position: | chr3:30567942-30568158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 157, 0 | 
| Conread position: | 2-215 | 
| Cow position: | chr3:12712264-12712047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 159, 0 | 
| Conread position: | 3-155 | 
| Cow position: | chr3:71497486-71497333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 3-170 | 
| Cow position: | chr3:20225816-20225982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 161, 0 | 
| Conread position: | 3-196 | 
| Cow position: | chr3:10958565-10958376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 3-200 | 
| Cow position: | chr3:55085530-55085326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 3-206 | 
| Cow position: | chr3:2903638-2903427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 3-207 | 
| Cow position: | chr3:48530298-48530501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 3-208 | 
| Cow position: | chr3:70371046-70370844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 161, 50 | 
| Conread position: | 3-213 | 
| Cow position: | chr3:5101100-5100896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 200, 93 | 
| Conread position: | 3-213 | 
| Cow position: | chr3:49461277-49461064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 147, 206 | 
| Conread position: | 3-215 | 
| Cow position: | chr3:31501015-31501222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 158, 28 | 
| Conread position: | 3-216 | 
| Cow position: | chr3:11986991-11987200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 4-215 | 
| Cow position: | chr3:55272379-55272176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 5-207 | 
| Cow position: | chr3:48269525-48269731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 156, 0 | 
| Conread position: | 5-209 | 
| Cow position: | chr3:72675749-72675958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 159, 0 | 
| Conread position: | 5-216 | 
| Cow position: | chr3:80973015-80973230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 156, 0 | 
| Conread position: | 10-216 | 
| Cow position: | chr3:78076859-78077065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 156, 35 | 
| Conread position: | 12-207 | 
| Cow position: | chr3:41367314-41367120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 159, 77 | 
| Conread position: | 14-216 | 
| Cow position: | chr3:67704207-67704414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 37, 197 | 
| Conread position: | 15-193 | 
| Cow position: | chr3:81939926-81940105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 146, 37 | 
| Conread position: | 16-215 | 
| Cow position: | chr3:83920874-83921074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 135, 29 | 
| Conread position: | 35-206 | 
| Cow position: | chr3:46161153-46160982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 38-207 | 
| Cow position: | chr3:70401598-70401766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 39-159 | 
| Cow position: | chr3:37041125-37041243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 46-215 | 
| Cow position: | chr3:8393049-8393222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 120, 0 | 
| Conread position: | 47-215 | 
| Cow position: | chr3:84000319-84000484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 54-203 | 
| Cow position: | chr3:9641275-9641425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 54-207 | 
| Cow position: | chr3:5096914-5097067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 35, 110 | 
| Conread position: | 54-207 | 
| Cow position: | chr3:13330061-13329914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 54-208 | 
| Cow position: | chr3:23471757-23471597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 107, 0 | 
| Conread position: | 55-215 | 
| Cow position: | chr3:4031680-4031843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 114, 0 | 
Show alignments to all cow chromosomes.
