Cow genome map


           Conread name:
           rpfco0103_n16.y1
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 33
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-166
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               84, 12
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               167, 41
               

               Conread position:
               1-202
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 39
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 173
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               123, 67
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               202, 44
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 82
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 96
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               165, 88
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               85, 160
               

               Conread position:
               1-207
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               168, 204
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               160, 204
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               160, 204
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               161, 52
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               202, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 159
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               160, 93
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               168, 37
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               160, 36
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               160, 207
               

               Conread position:
               1-227
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               158, 198
               

               Conread position:
               2-162
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               2-179
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-207
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               151, 0
               

               Conread position:
               2-215
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               151, 207
               

               Conread position:
               2-216
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               3-152
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               3-152
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               3-155
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-158
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               3-169
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               3-198
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               3-203
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-206
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               7-159
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               7-202
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               146, 0
               

               Conread position:
               7-215
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               11-209
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               12-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               13-158
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               13-203
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               146, 42
               

               Conread position:
               18-207
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               20-159
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               20-213
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               143, 71
               

               Conread position:
               25-203
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               29-199
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               36-208
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               47-207
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               52-207
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               54-201
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               59-206
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               59-207
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               67-201
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               94, 0
               
Show alignments to all cow chromosomes.