Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-182
Cow position: chr1:67289423-67289609 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 135

Conread position: 1-388
Cow position: chr1:31415211-31414798 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-390
Cow position: chr1:17938740-17938325 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 394

Conread position: 1-390
Cow position: chr1:61203397-61203813 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 177

Conread position: 2-142
Cow position: chr1:80902565-80902420 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 105

Conread position: 2-153
Cow position: chr1:73434312-73434155 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 2-159
Cow position: chr1:35711680-35711842 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 2-164
Cow position: chr1:81861024-81860856 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 2-164
Cow position: chr1:99582779-99582621 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 2-169
Cow position: chr1:24203636-24203476 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 58

Conread position: 2-173
Cow position: chr1:22223037-22223214 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-174
Cow position: chr1:14361458-14361280 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-174
Cow position: chr1:33899280-33899447 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 97

Conread position: 2-175
Cow position: chr1:7300037-7300214 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 134

Conread position: 2-176
Cow position: chr1:84442977-84443157 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position: chr1:55318511-55318328 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 100

Conread position: 2-182
Cow position: chr1:79335165-79334979 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 2-183
Cow position: chr1:40533057-40532872 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 108

Conread position: 2-183
Cow position: chr1:57397334-57397144 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-185
Cow position: chr1:86506612-86506418 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 110

Conread position: 2-193
Cow position: chr1:32100079-32099882 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 2-204
Cow position: chr1:83108597-83108389 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 2-211
Cow position: chr1:72183865-72183650 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-225
Cow position: chr1:11666549-11666321 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 225

Conread position: 2-228
Cow position: chr1:10033523-10033756 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-230
Cow position: chr1:92035111-92035345 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-231
Cow position: chr1:52171796-52171560 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-231
Cow position: chr1:67001223-67001458 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-237
Cow position: chr1:8471146-8470908 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 2-238
Cow position: chr1:7196206-7195964 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position: chr1:72086609-72086854 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:1023786-1023541 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:3669111-3668863 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:4208900-4208656 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:7324084-7324328 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:8556699-8556943 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:8745511-8745754 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position: chr1:9263092-9262848 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:11199618-11199373 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:14241046-14240810 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 121

Conread position: 2-240
Cow position: chr1:15149630-15149386 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:16798081-16797839 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 2-240
Cow position: chr1:17436661-17436418 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-240
Cow position: chr1:17765392-17765636 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:18087442-18087686 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:18487164-18486920 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:19161982-19162225 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 2-240
Cow position: chr1:19236484-19236240 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:19776078-19775834 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:20527173-20527417 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:20648453-20648697 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:20847000-20846756 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:21377545-21377301 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:25053574-25053330 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:26537173-26536929 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:26587964-26588207 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position: chr1:26607552-26607308 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:28714052-28714296 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:28812229-28811985 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position: chr1:29365421-29365663 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-240
Cow position: chr1:30103564-30103320 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:31106380-31106136 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:31351753-31351509 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:31534865-31535109 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:32564914-32564674 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 159

Conread position: 2-240
Cow position: chr1:32961487-32961246 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:33040019-33039775 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:33443148-33442911 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 65

Conread position: 2-240
Cow position: chr1:38279726-38279483 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr1:38478318-38478562 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:38711725-38711969 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 213

Conread position: 2-240
Cow position: chr1:42739420-42739664 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:47118970-47119214 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:48249728-48249972 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:49267896-49268141 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:52067640-52067884 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:54932941-54933185 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:56169973-56170217 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:56205797-56205553 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57363319-57363076 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 2-240
Cow position: chr1:57505804-57506048 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57526289-57526533 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57570844-57571088 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57635807-57635561 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position: chr1:58171753-58171995 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 2-240
Cow position: chr1:59203250-59203006 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:59483850-59483606 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:60251413-60251169 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:60342064-60342313 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:61340307-61340063 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:62927482-62927726 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:63045898-63046142 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:63048592-63048835 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 240

Conread position: 2-240
Cow position: chr1:63341459-63341215 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:66490595-66490838 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:66972144-66971902 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 2-240
Cow position: chr1:67832123-67831879 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:68145958-68145714 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:68602617-68602373 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:69406171-69406415 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:69504361-69504117 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:70051254-70051496 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 2-240
Cow position: chr1:70069678-70069935 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:71794546-71794790 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:72812174-72812417 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 225

Conread position: 2-240
Cow position: chr1:75402909-75403151 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 2-240
Cow position: chr1:76618460-76618217 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-240
Cow position: chr1:76872895-76873139 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position: chr1:76878045-76878289 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:78587445-78587201 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:81302128-81302373 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:82478998-82479240 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 2-240
Cow position: chr1:85630349-85630593 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:85777446-85777202 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:86545124-86544880 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:86593291-86593047 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:86600002-86599758 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:87722674-87722430 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:88178871-88179115 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:89186434-89186201 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 42, 100

Conread position: 2-240
Cow position: chr1:89431416-89431660 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:90605863-90605619 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:91673245-91673489 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:93857536-93857779 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 149

Conread position: 2-240
Cow position: chr1:99916453-99916696 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position: chr1:100509764-100510005 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 180

Conread position: 2-240
Cow position: chr1:101797610-101797847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 103

Conread position: 2-240
Cow position: chr1:102431726-102431482 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr1:20831895-20832140 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr1:101010902-101010657 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 2-243
Cow position: chr1:28520664-28520911 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position: chr1:31363089-31362853 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 2-247
Cow position: chr1:23040109-23040357 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 105

Conread position: 2-294
Cow position: chr1:39889152-39889450 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-366
Cow position: chr1:26812059-26811668 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-367
Cow position: chr1:3970251-3969875 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 264

Conread position: 2-367
Cow position: chr1:10725637-10726031 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr1:21090463-21090872 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 313

Conread position: 2-367
Cow position: chr1:21134094-21133724 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 267

Conread position: 2-367
Cow position: chr1:24441034-24440654 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 2-367
Cow position: chr1:29037555-29037947 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-367
Cow position: chr1:33854295-33854674 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 69

Conread position: 2-367
Cow position: chr1:46613279-46612890 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 161

Conread position: 2-367
Cow position: chr1:48345198-48345577 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 283

Conread position: 2-367
Cow position: chr1:73064322-73063931 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-367
Cow position: chr1:78922000-78921606 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr1:79553508-79553900 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr1:91105055-91105449 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 258

Conread position: 2-367
Cow position: chr1:91902032-91902426 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-368
Cow position: chr1:71559731-71559342 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-372
Cow position: chr1:40058118-40058517 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-377
Cow position: chr1:21576561-21576960 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 2-377
Cow position: chr1:67005894-67006294 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 133

Conread position: 2-377
Cow position: chr1:69671608-69671205 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-382
Cow position: chr1:20867592-20867185 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 42, 0

Conread position: 2-383
Cow position: chr1:56631402-56631802 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 108

Conread position: 2-383
Cow position: chr1:69769832-69770242 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-383
Cow position: chr1:79589872-79590275 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 290

Conread position: 2-383
Cow position: chr1:82909816-82909411 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 2-383
Cow position: chr1:102552025-102552427 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 286

Conread position: 2-384
Cow position: chr1:21458705-21459102 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 161

Conread position: 2-384
Cow position: chr1:72767010-72766614 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 2-385
Cow position: chr1:13405372-13404961 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-385
Cow position: chr1:22012948-22012537 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 298

Conread position: 2-385
Cow position: chr1:22529789-22529387 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 2-385
Cow position: chr1:28677084-28677479 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 2-385
Cow position: chr1:35598797-35598387 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-385
Cow position: chr1:40681718-40681307 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 308

Conread position: 2-385
Cow position: chr1:55274029-55273618 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-385
Cow position: chr1:56424924-56425336 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 205

Conread position: 2-385
Cow position: chr1:79633539-79633126 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-385
Cow position: chr1:85794970-85795370 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-385
Cow position: chr1:85807597-85807189 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 116

Conread position: 2-386
Cow position: chr1:53311243-53311654 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 389

Conread position: 2-387
Cow position: chr1:51883628-51884035 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 2-387
Cow position: chr1:56644865-56644462 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 2-387
Cow position: chr1:99572550-99572138 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 2-388
Cow position: chr1:7837736-7837332 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 2-388
Cow position: chr1:18024784-18024391 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 33

Conread position: 2-388
Cow position: chr1:21114408-21113994 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 294

Conread position: 2-388
Cow position: chr1:31191402-31190996 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 46

Conread position: 2-388
Cow position: chr1:56141340-56140930 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 391

Conread position: 2-388
Cow position: chr1:72139225-72139624 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 105

Conread position: 2-388
Cow position: chr1:86705165-86705566 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 284

Conread position: 2-388
Cow position: chr1:89484129-89484521 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-388
Cow position: chr1:95474875-95474473 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 54

Conread position: 2-388
Cow position: chr1:101130992-101130592 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 126

Conread position: 2-389
Cow position: chr1:101524373-101523971 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 175

Conread position: 2-390
Cow position: chr1:3383304-3382890 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 294

Conread position: 2-390
Cow position: chr1:6197263-6196850 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-390
Cow position: chr1:9261525-9261925 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 155

Conread position: 2-390
Cow position: chr1:13251503-13251116 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 225

Conread position: 2-390
Cow position: chr1:13438134-13438548 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-390
Cow position: chr1:18195641-18196024 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 31

Conread position: 2-390
Cow position: chr1:30078956-30079370 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-390
Cow position: chr1:33548381-33547972 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 147

Conread position: 2-390
Cow position: chr1:57659632-57660029 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 219

Conread position: 2-390
Cow position: chr1:61342698-61342277 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 210

Conread position: 2-390
Cow position: chr1:65389572-65389986 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-390
Cow position: chr1:67078811-67078398 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-390
Cow position: chr1:68818889-68818480 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 47, 120

Conread position: 2-390
Cow position: chr1:89111845-89112250 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 287

Conread position: 2-391
Cow position: chr1:21132850-21132444 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 200

Conread position: 2-391
Cow position: chr1:31392280-31391863 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 273

Conread position: 3-240
Cow position: chr1:33715974-33716217 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position: chr1:55044248-55044005 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position: chr1:80565063-80564820 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-367
Cow position: chr1:48811180-48810787 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-388
Cow position: chr1:30034644-30035043 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 155

Conread position: 3-390
Cow position: chr1:100451653-100451245 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 292

Conread position: 4-182
Cow position: chr1:79453951-79453767 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position: chr1:90865056-90865293 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 52

Conread position: 4-386
Cow position: chr1:89090521-89090111 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 148

Conread position: 4-387
Cow position: chr1:20001984-20001572 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 302

Conread position: 4-388
Cow position: chr1:45021249-45021655 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 4-388
Cow position: chr1:58418691-58419100 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 291

Conread position: 4-390
Cow position: chr1:25552822-25553233 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 4-391
Cow position: chr1:40577957-40578350 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 6-388
Cow position: chr1:71791939-71792358 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 354

Conread position: 7-240
Cow position: chr1:98354377-98354138 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 8-383
Cow position: chr1:67317722-67318111 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 214

Conread position: 8-388
Cow position: chr1:24654854-24655259 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 287

Conread position: 8-388
Cow position: chr1:70388295-70387898 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 118

Conread position: 9-377
Cow position: chr1:19441505-19441124 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 81

Conread position: 10-383
Cow position: chr1:53519687-53520086 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 286

Conread position: 10-389
Cow position: chr1:42056638-42057022 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 91

Conread position: 13-383
Cow position: chr1:92279769-92279388 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 269

Conread position: 13-385
Cow position: chr1:73403812-73404204 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 70

Conread position: 15-363
Cow position: chr1:27493991-27494358 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 18-368
Cow position: chr1:52864245-52863881 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 20-366
Cow position: chr1:28414184-28413818 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 89

Conread position: 26-367
Cow position: chr1:57758952-57759320 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 234

Conread position: 28-382
Cow position: chr1:57679317-57678956 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 181

Conread position: 55-377
Cow position: chr1:17009651-17009316 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 230

Conread position: 62-366
Cow position: chr1:57958479-57958154 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 224

Conread position: 69-355
Cow position: chr1:9377393-9377085 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 225

Conread position: 69-382
Cow position: chr1:22226730-22227044 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 87

Conread position: 70-384
Cow position: chr1:30494655-30494989 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 220

Conread position: 72-366
Cow position: chr1:98989316-98989021 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 170, 10

Conread position: 72-388
Cow position: chr1:24562663-24562326 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 226

Conread position: 96-367
Cow position: chr1:31707595-31707889 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 98, 158

Conread position: 96-383
Cow position: chr1:66685399-66685109 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 177, 84

Conread position: 102-385
Cow position: chr1:11874519-11874218 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 40

Conread position: 103-388
Cow position: chr1:43449381-43449081 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 101, 170

Conread position: 104-389
Cow position: chr1:6165108-6165406 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 50

Conread position: 113-367
Cow position: chr1:90393624-90393350 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 20

Conread position: 114-377
Cow position: chr1:100888376-100888092 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 179

Conread position: 115-383
Cow position: chr1:100340437-100340166 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 135

Conread position: 124-390
Cow position: chr1:82091037-82091323 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 92, 45

Conread position: 127-388
Cow position: chr1:55328083-55327808 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 110, 51

Conread position: 230-367
Cow position: chr1:72103384-72103517 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 232-389
Cow position: chr1:28176025-28176182 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 42

Conread position: 236-367
Cow position: chr1:7415760-7415892 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 34

Conread position: 236-368
Cow position: chr1:81308635-81308769 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 236-377
Cow position: chr1:31646350-31646208 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 37

Conread position: 236-388
Cow position: chr1:64595036-64594881 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 37

Conread position: 243-390
Cow position: chr1:3263268-3263418 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 32

Conread position: 244-378
Cow position: chr1:81860230-81860091 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 31

Conread position: 244-384
Cow position: chr1:68281829-68281974 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 31

Conread position: 244-388
Cow position: chr1:52510834-52510689 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 27

Conread position: 244-388
Cow position: chr1:56746164-56746313 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 31

Conread position: 244-388
Cow position: chr1:67913364-67913505 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 29

Conread position: 244-389
Cow position: chr1:63239974-63240122 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 29

Conread position: 245-388
Cow position: chr1:26838236-26838384 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 30

Conread position: 247-385
Cow position: chr1:59202942-59202803 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 26

Show alignments to all cow chromosomes.