Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 2-134
Cow position: chr10:33868146-33868008 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 2-144
Cow position: chr10:51950059-51949911 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 2-146
Cow position: chr10:25004951-25005101 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-159
Cow position: chr10:52738895-52739058 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 2-164
Cow position: chr10:55974035-55974203 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 2-165
Cow position: chr10:3817310-3817476 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 145

Conread position: 2-173
Cow position: chr10:66773357-66773180 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 2-174
Cow position: chr10:3495180-3495002 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 2-176
Cow position: chr10:25632799-25632621 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 116

Conread position: 2-176
Cow position: chr10:57473265-57473085 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position: chr10:32699703-32699888 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 82

Conread position: 2-186
Cow position: chr10:38273028-38273218 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 2-190
Cow position: chr10:46171450-46171644 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 2-195
Cow position: chr10:21414686-21414487 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 113

Conread position: 2-204
Cow position: chr10:66142522-66142730 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-205
Cow position: chr10:40347620-40347411 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-207
Cow position: chr10:17436307-17436517 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 47, 117

Conread position: 2-211
Cow position: chr10:34335459-34335244 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-213
Cow position: chr10:128635-128850 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 189

Conread position: 2-225
Cow position: chr10:12101332-12101106 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 92

Conread position: 2-238
Cow position: chr10:325720-325484 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 142

Conread position: 2-238
Cow position: chr10:22250269-22250511 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:1377455-1377212 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 180

Conread position: 2-240
Cow position: chr10:1380534-1380778 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:6221283-6221527 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:6253790-6253548 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 2-240
Cow position: chr10:7858292-7858056 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 103

Conread position: 2-240
Cow position: chr10:8293168-8293412 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:8681662-8681906 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:10585168-10585408 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 113

Conread position: 2-240
Cow position: chr10:14332803-14332559 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position: chr10:15489862-15490109 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 113

Conread position: 2-240
Cow position: chr10:17222410-17222654 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:18106603-18106846 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-240
Cow position: chr10:19390554-19390310 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:19514268-19514511 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 2-240
Cow position: chr10:21450161-21449917 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:21489976-21490219 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-240
Cow position: chr10:21729665-21729421 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:22104518-22104762 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:23412084-23412328 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:23849004-23849248 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:25563516-25563272 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:26539871-26539628 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position: chr10:26569732-26569488 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:26923251-26923007 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:27004542-27004298 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:30682454-30682211 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position: chr10:31022017-31021773 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:32086726-32086964 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 45, 105

Conread position: 2-240
Cow position: chr10:36275138-36274894 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:36879418-36879174 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:37126179-37125935 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:37139266-37139022 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:37772917-37773161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:38817945-38818189 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:38941157-38941400 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 2-240
Cow position: chr10:38942664-38942908 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:39038013-39037769 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:41405414-41405658 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:43080799-43081043 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:46225870-46226106 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 101

Conread position: 2-240
Cow position: chr10:48241519-48241275 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:48374407-48374163 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:49503971-49504215 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:51558438-51558682 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr10:51837678-51837435 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 122

Conread position: 2-240
Cow position: chr10:57554297-57554054 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 225

Conread position: 2-240
Cow position: chr10:62775907-62776151 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-247
Cow position: chr10:24297465-24297214 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-248
Cow position: chr10:59840742-59840491 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 202

Conread position: 2-285
Cow position: chr10:32009114-32009403 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 2-346
Cow position: chr10:3181516-3181154 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 2-366
Cow position: chr10:55096101-55096491 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-367
Cow position: chr10:278318-277925 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-367
Cow position: chr10:1662929-1662541 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-367
Cow position: chr10:7895409-7895017 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-367
Cow position: chr10:9682130-9681741 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-367
Cow position: chr10:14806974-14807369 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position: chr10:17959403-17959790 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 2-367
Cow position: chr10:19141571-19141178 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr10:19842709-19843103 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-367
Cow position: chr10:21398183-21397789 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr10:22380755-22381149 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 160

Conread position: 2-367
Cow position: chr10:26765586-26765979 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-367
Cow position: chr10:28030896-28030504 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 362

Conread position: 2-367
Cow position: chr10:30719733-30720127 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr10:32364977-32365371 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 298

Conread position: 2-367
Cow position: chr10:33556620-33556231 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position: chr10:35824305-35823911 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 2-367
Cow position: chr10:38843201-38843556 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 228
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 105

Conread position: 2-367
Cow position: chr10:41160453-41160837 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 88

Conread position: 2-367
Cow position: chr10:41561438-41561044 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 307

Conread position: 2-367
Cow position: chr10:41570142-41570532 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 187

Conread position: 2-367
Cow position: chr10:42213912-42214307 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position: chr10:45647894-45648287 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr10:45978505-45978131 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 263

Conread position: 2-367
Cow position: chr10:47084072-47084458 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 290

Conread position: 2-367
Cow position: chr10:47909655-47910047 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 2-373
Cow position: chr10:50451595-50451989 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 387

Conread position: 2-374
Cow position: chr10:64304988-64304594 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 362

Conread position: 2-375
Cow position: chr10:22344502-22344904 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 117

Conread position: 2-381
Cow position: chr10:37530763-37530373 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 249

Conread position: 2-381
Cow position: chr10:50199021-50199429 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 2-382
Cow position: chr10:20515951-20516362 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 162

Conread position: 2-383
Cow position: chr10:11000405-11000781 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 45, 97

Conread position: 2-383
Cow position: chr10:11623684-11623279 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 104

Conread position: 2-383
Cow position: chr10:14908297-14908702 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-383
Cow position: chr10:14976330-14976712 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 47, 18

Conread position: 2-383
Cow position: chr10:38542684-38542273 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 297

Conread position: 2-383
Cow position: chr10:40149100-40148708 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 210

Conread position: 2-383
Cow position: chr10:40736725-40737124 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 2-383
Cow position: chr10:50017324-50016931 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 107

Conread position: 2-385
Cow position: chr10:52826589-52826180 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-386
Cow position: chr10:31526748-31527148 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 140

Conread position: 2-387
Cow position: chr10:59174006-59173616 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 46

Conread position: 2-387
Cow position: chr10:69936036-69935657 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 191, 47

Conread position: 2-388
Cow position: chr10:2466853-2466451 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 107

Conread position: 2-388
Cow position: chr10:5785196-5784789 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 120

Conread position: 2-388
Cow position: chr10:8459264-8459677 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-388
Cow position: chr10:20380950-20380534 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 140

Conread position: 2-388
Cow position: chr10:24750948-24751364 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 2-388
Cow position: chr10:26732908-26732515 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 291

Conread position: 2-388
Cow position: chr10:29629230-29628814 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-388
Cow position: chr10:31375373-31374962 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 2-388
Cow position: chr10:32703800-32704216 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-388
Cow position: chr10:40140204-40139801 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 240

Conread position: 2-389
Cow position: chr10:16647271-16646859 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 207

Conread position: 2-390
Cow position: chr10:2117404-2116995 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 388

Conread position: 2-390
Cow position: chr10:3507101-3506692 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 197

Conread position: 2-390
Cow position: chr10:7279063-7278650 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position: chr10:11110322-11110723 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 37

Conread position: 2-390
Cow position: chr10:14846295-14846696 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 83

Conread position: 2-390
Cow position: chr10:29174262-29174678 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 307

Conread position: 2-390
Cow position: chr10:34664731-34664324 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 330

Conread position: 2-390
Cow position: chr10:41139982-41139567 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 2-390
Cow position: chr10:56688025-56687635 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 229

Conread position: 2-390
Cow position: chr10:62405733-62405342 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 210

Conread position: 3-240
Cow position: chr10:19491738-19491495 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position: chr10:39441209-39441451 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 3-240
Cow position: chr10:39970981-39971224 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-388
Cow position: chr10:29106775-29106372 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 3-390
Cow position: chr10:17492373-17491953 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 302

Conread position: 4-240
Cow position: chr10:49430696-49430940 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 43, 216

Conread position: 4-366
Cow position: chr10:46173151-46172767 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 287

Conread position: 4-388
Cow position: chr10:19894083-19894456 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 105

Conread position: 5-172
Cow position: chr10:39775966-39775793 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 127

Conread position: 5-240
Cow position: chr10:42744628-42744873 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 6-240
Cow position: chr10:57986655-57986414 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 6-388
Cow position: chr10:37788954-37788550 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 169

Conread position: 7-240
Cow position: chr10:64347014-64347252 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 8-211
Cow position: chr10:48742953-48742747 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 13-240
Cow position: chr10:7260221-7259988 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 13-375
Cow position: chr10:21710186-21709797 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 284

Conread position: 18-384
Cow position: chr10:11217138-11216745 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 279

Conread position: 23-385
Cow position: chr10:44764747-44765139 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 277

Conread position: 26-367
Cow position: chr10:326157-326521 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 269

Conread position: 59-389
Cow position: chr10:49914642-49914305 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 75

Conread position: 62-383
Cow position: chr10:25341215-25341555 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 51

Conread position: 63-376
Cow position: chr10:20388699-20388374 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 219

Conread position: 69-377
Cow position: chr10:47772534-47772857 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 37

Conread position: 69-386
Cow position: chr10:19523034-19522704 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 66

Conread position: 87-367
Cow position: chr10:37909021-37908718 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 92, 112

Conread position: 87-390
Cow position: chr10:55036547-55036873 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 16

Conread position: 92-367
Cow position: chr10:55930616-55930914 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 202

Conread position: 146-388
Cow position: chr10:11406471-11406730 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 142

Conread position: 149-385
Cow position: chr10:57553949-57553692 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 104

Conread position: 163-366
Cow position: chr10:3494728-3494504 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 129

Conread position: 173-388
Cow position: chr10:28568650-28568887 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 119

Conread position: 179-367
Cow position: chr10:54072551-54072349 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 106

Conread position: 189-383
Cow position: chr10:31636917-31637108 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 33

Conread position: 230-383
Cow position: chr10:24759-24915 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 43

Conread position: 230-388
Cow position: chr10:21414219-21414055 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 46

Conread position: 231-390
Cow position: chr10:14964277-14964114 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 55

Conread position: 236-367
Cow position: chr10:7826103-7825970 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 37

Conread position: 236-367
Cow position: chr10:20870825-20870958 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 46

Conread position: 236-388
Cow position: chr10:14849153-14849004 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 134, 37

Conread position: 236-388
Cow position: chr10:60354437-60354592 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 47

Conread position: 238-388
Cow position: chr10:39775287-39775138 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 37

Conread position: 244-388
Cow position: chr10:43289073-43288928 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 31

Conread position: 245-391
Cow position: chr10:31006009-31005862 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 28

Show alignments to all cow chromosomes.