Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-239
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-153
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 2-154
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 2-160
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 2-175
Cow position:
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-200
Cow position:
Alignm length: 205
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 2-201
Cow position:
Alignm length: 206
Alignm identity: 165
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 192

Conread position: 2-206
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-206
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-219
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 155

Conread position: 2-224
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 157

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 174

Conread position: 2-240
Cow position:
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 194

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 2-243
Cow position:
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 290

Conread position: 2-367
Cow position:
Alignm length: 390
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 137

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 213

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 299

Conread position: 2-367
Cow position:
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 2-368
Cow position:
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 2-368
Cow position:
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 137

Conread position: 2-377
Cow position:
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-382
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 297

Conread position: 2-385
Cow position:
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 167

Conread position: 2-386
Cow position:
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 2-388
Cow position:
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 2-388
Cow position:
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 374

Conread position: 2-389
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 124

Conread position: 2-389
Cow position:
Alignm length: 417
Alignm identity: 289
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 37, 298

Conread position: 2-389
Cow position:
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-390
Cow position:
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 109

Conread position: 2-390
Cow position:
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 3-241
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 4-165
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 4-383
Cow position:
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 343

Conread position: 7-240
Cow position:
Alignm length: 240
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 8-380
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 9

Conread position: 17-366
Cow position:
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 20-387
Cow position:
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 269

Conread position: 23-388
Cow position:
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 104

Conread position: 26-371
Cow position:
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 272

Conread position: 69-367
Cow position:
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 221

Conread position: 71-366
Cow position:
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 183

Conread position: 75-367
Cow position:
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 76-377
Cow position:
Alignm length: 319
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 94, 24

Conread position: 88-388
Cow position:
Alignm length: 315
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 161

Conread position: 89-367
Cow position:
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 115

Conread position: 90-388
Cow position:
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 189

Conread position: 92-388
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 125, 134

Conread position: 95-388
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 135, 78

Conread position: 97-367
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 197

Conread position: 98-388
Cow position:
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 200

Conread position: 150-367
Cow position:
Alignm length: 240
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 142

Conread position: 199-367
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 14

Conread position: 230-384
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 43

Conread position: 236-367
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 37

Conread position: 236-371
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 242-367
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 31

Conread position: 251-385
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 22

Show alignments to all cow chromosomes.