Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-247
Cow position:
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 1-388
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 2-151
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 2-173
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 117

Conread position: 2-181
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 104

Conread position: 2-183
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-206
Cow position:
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-210
Cow position:
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 159

Conread position: 2-225
Cow position:
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position:
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position:
Alignm length: 244
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 206

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 197

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 104

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 96

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 132

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 121

Conread position: 2-243
Cow position:
Alignm length: 248
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 2-243
Cow position:
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-343
Cow position:
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 94

Conread position: 2-366
Cow position:
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-366
Cow position:
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 31

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 191

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 81

Conread position: 2-376
Cow position:
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 294

Conread position: 2-377
Cow position:
Alignm length: 391
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 55

Conread position: 2-377
Cow position:
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 389

Conread position: 2-383
Cow position:
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-385
Cow position:
Alignm length: 414
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-385
Cow position:
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 290

Conread position: 2-385
Cow position:
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-385
Cow position:
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-385
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 2-388
Cow position:
Alignm length: 417
Alignm identity: 277
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 305

Conread position: 2-388
Cow position:
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 178

Conread position: 2-388
Cow position:
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 301

Conread position: 2-388
Cow position:
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 180

Conread position: 2-388
Cow position:
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 2-389
Cow position:
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 187

Conread position: 2-390
Cow position:
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position:
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-390
Cow position:
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 186

Conread position: 2-390
Cow position:
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 308

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 151

Conread position: 2-390
Cow position:
Alignm length: 419
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 2-390
Cow position:
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 3-377
Cow position:
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 210

Conread position: 4-241
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 191

Conread position: 4-247
Cow position:
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 103

Conread position: 4-388
Cow position:
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 4-389
Cow position:
Alignm length: 395
Alignm identity: 244
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 43, 201

Conread position: 6-240
Cow position:
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 94

Conread position: 8-382
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 24

Conread position: 8-389
Cow position:
Alignm length: 409
Alignm identity: 276
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 39, 114

Conread position: 9-365
Cow position:
Alignm length: 366
Alignm identity: 253
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 196

Conread position: 13-372
Cow position:
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 275

Conread position: 13-375
Cow position:
Alignm length: 393
Alignm identity: 272
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 286

Conread position: 20-389
Cow position:
Alignm length: 390
Alignm identity: 257
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 93

Conread position: 26-367
Cow position:
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 274

Conread position: 39-390
Cow position:
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 264

Conread position: 59-388
Cow position:
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 96

Conread position: 69-367
Cow position:
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 212

Conread position: 69-391
Cow position:
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 218

Conread position: 72-381
Cow position:
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 32

Conread position: 88-391
Cow position:
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 27

Conread position: 125-378
Cow position:
Alignm length: 280
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 170

Conread position: 164-367
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 128

Conread position: 164-388
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 72

Conread position: 230-383
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 43

Conread position: 236-383
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 37

Conread position: 236-388
Cow position:
Alignm length: 154
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 110, 37

Conread position: 243-388
Cow position:
Alignm length: 147
Alignm identity: 122
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 127, 30

Conread position: 244-390
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 31

Conread position: 249-385
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 24

Conread position: 253-388
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 20

Conread position: 263-383
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 8

Show alignments to all cow chromosomes.