Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-361
Cow position:
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 369

Conread position: 2-142
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 2-154
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 94

Conread position: 2-184
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-196
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 2-202
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 62

Conread position: 2-205
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 2-211
Cow position:
Alignm length: 216
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-213
Cow position:
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-225
Cow position:
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-234
Cow position:
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-238
Cow position:
Alignm length: 243
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 211

Conread position: 2-238
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 85

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 112

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 200

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 252
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 46, 107

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-242
Cow position:
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-252
Cow position:
Alignm length: 272
Alignm identity: 198
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 2-323
Cow position:
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 335

Conread position: 2-345
Cow position:
Alignm length: 350
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-358
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-364
Cow position:
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position:
Alignm length: 374
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 230

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 112

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 291

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 2-367
Cow position:
Alignm length: 391
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 252

Conread position: 2-371
Cow position:
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-377
Cow position:
Alignm length: 402
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-377
Cow position:
Alignm length: 401
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-377
Cow position:
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 395

Conread position: 2-378
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 150

Conread position: 2-379
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 118

Conread position: 2-383
Cow position:
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 313

Conread position: 2-383
Cow position:
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 331

Conread position: 2-385
Cow position:
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 255

Conread position: 2-385
Cow position:
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-385
Cow position:
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 231

Conread position: 2-385
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 224

Conread position: 2-385
Cow position:
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 189

Conread position: 2-386
Cow position:
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 41

Conread position: 2-386
Cow position:
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-387
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-388
Cow position:
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 194

Conread position: 2-388
Cow position:
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 2-388
Cow position:
Alignm length: 402
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 2-388
Cow position:
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 118

Conread position: 2-389
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 393

Conread position: 2-390
Cow position:
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 187

Conread position: 2-390
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 176

Conread position: 2-390
Cow position:
Alignm length: 406
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 211

Conread position: 2-390
Cow position:
Alignm length: 405
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 159

Conread position: 2-390
Cow position:
Alignm length: 417
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 3-240
Cow position:
Alignm length: 244
Alignm identity: 184
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 97

Conread position: 4-240
Cow position:
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 174

Conread position: 4-388
Cow position:
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 45

Conread position: 4-388
Cow position:
Alignm length: 410
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 39, 129

Conread position: 6-388
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 172

Conread position: 7-385
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 293

Conread position: 8-240
Cow position:
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 76

Conread position: 8-385
Cow position:
Alignm length: 393
Alignm identity: 260
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 101

Conread position: 8-387
Cow position:
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 59

Conread position: 10-240
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 196

Conread position: 13-367
Cow position:
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 287

Conread position: 35-367
Cow position:
Alignm length: 367
Alignm identity: 263
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 12, 269

Conread position: 59-382
Cow position:
Alignm length: 339
Alignm identity: 219
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 53

Conread position: 69-388
Cow position:
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 222

Conread position: 85-390
Cow position:
Alignm length: 309
Alignm identity: 205
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 218, 91

Conread position: 90-386
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 50

Conread position: 92-367
Cow position:
Alignm length: 300
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 115, 202

Conread position: 99-383
Cow position:
Alignm length: 308
Alignm identity: 212
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 87, 194

Conread position: 110-389
Cow position:
Alignm length: 307
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 69, 190

Conread position: 117-389
Cow position:
Alignm length: 296
Alignm identity: 210
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 74, 178

Conread position: 124-391
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 139-388
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 161-382
Cow position:
Alignm length: 228
Alignm identity: 154
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 108

Conread position: 227-388
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 84, 9

Conread position: 244-384
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 29

Conread position: 244-388
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 67, 29

Conread position: 250-390
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 23

Conread position: 253-388
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 20

Show alignments to all cow chromosomes.