Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-389
Cow position: chr15:13286478-13286066 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 2-134
Cow position: chr15:23708887-23708749 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 111

Conread position: 2-174
Cow position: chr15:21645478-21645300 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-179
Cow position: chr15:18660942-18661125 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 2-180
Cow position: chr15:16966871-16966690 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 144

Conread position: 2-193
Cow position: chr15:17398320-17398517 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-197
Cow position: chr15:42726839-42727043 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 98

Conread position: 2-202
Cow position: chr15:20404991-20404788 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 131

Conread position: 2-237
Cow position: chr15:2633084-2632842 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position: chr15:4219289-4219047 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position: chr15:6550989-6550747 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-238
Cow position: chr15:17035006-17034760 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position: chr15:5196980-5197218 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 84

Conread position: 2-240
Cow position: chr15:313175-312932 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 108

Conread position: 2-240
Cow position: chr15:461620-461864 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:481209-481453 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:2644721-2644477 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:2664013-2664257 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr15:2898365-2898128 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-240
Cow position: chr15:4081627-4081870 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 2-240
Cow position: chr15:4140284-4140040 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:4952952-4953196 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:6120012-6120246 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 62

Conread position: 2-240
Cow position: chr15:6616423-6616667 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:6658490-6658246 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position: chr15:6762471-6762227 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:6805338-6805581 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 204

Conread position: 2-240
Cow position: chr15:7270962-7271207 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 141

Conread position: 2-240
Cow position: chr15:7565628-7565872 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:7985805-7985558 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:13546423-13546183 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 95

Conread position: 2-240
Cow position: chr15:16800899-16801143 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:17074737-17074494 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 2-240
Cow position: chr15:17267139-17267383 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:19735174-19734930 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:20413200-20413444 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:21663117-21662873 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:21806474-21806718 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:21825490-21825734 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 111

Conread position: 2-240
Cow position: chr15:23666869-23666625 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:24090453-24090697 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:25069869-25069625 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:25132582-25132826 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:27747895-27747651 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:28487503-28487260 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 2-240
Cow position: chr15:31585773-31585529 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:32646985-32647229 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:32717984-32717742 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 56, 127

Conread position: 2-240
Cow position: chr15:32858491-32858734 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-240
Cow position: chr15:35643826-35643582 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr15:36940757-36940513 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:42532675-42532919 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:42943981-42943737 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr15:44073072-44073316 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-240
Cow position: chr15:44666586-44666342 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr15:45244219-45244468 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 210

Conread position: 2-240
Cow position: chr15:49242691-49242447 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr15:51220367-51220612 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position: chr15:2795820-2796067 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position: chr15:4688657-4688904 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 226

Conread position: 2-245
Cow position: chr15:32491263-32491014 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-262
Cow position: chr15:32697374-32697636 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 160

Conread position: 2-351
Cow position: chr15:4380697-4380322 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 293

Conread position: 2-365
Cow position: chr15:67934-67549 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-367
Cow position: chr15:29683-29289 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-367
Cow position: chr15:1774071-1774464 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-367
Cow position: chr15:1785391-1785785 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-367
Cow position: chr15:3008213-3007820 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr15:3721507-3721121 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 2-367
Cow position: chr15:4213794-4214179 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr15:4629611-4629227 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 122

Conread position: 2-367
Cow position: chr15:12858767-12859160 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 196

Conread position: 2-367
Cow position: chr15:13430449-13430839 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 197

Conread position: 2-367
Cow position: chr15:22760364-22759985 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 2-367
Cow position: chr15:31270246-31269854 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr15:32714328-32714720 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 294

Conread position: 2-367
Cow position: chr15:33753655-33753263 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-367
Cow position: chr15:34063576-34063973 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 300

Conread position: 2-371
Cow position: chr15:36329835-36329436 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-374
Cow position: chr15:4895745-4895363 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 42, 226

Conread position: 2-374
Cow position: chr15:5020017-5020386 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 69

Conread position: 2-376
Cow position: chr15:6330759-6331146 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 47

Conread position: 2-377
Cow position: chr15:7577791-7578189 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-377
Cow position: chr15:8029383-8028989 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 2-379
Cow position: chr15:4815185-4815587 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 2-381
Cow position: chr15:28235624-28236011 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 2-382
Cow position: chr15:6081327-6081729 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 290
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 87

Conread position: 2-383
Cow position: chr15:4788173-4787765 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-383
Cow position: chr15:13682961-13683375 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-383
Cow position: chr15:16788006-16787609 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 161

Conread position: 2-385
Cow position: chr15:5640967-5640555 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-385
Cow position: chr15:7587156-7586750 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 390

Conread position: 2-385
Cow position: chr15:18265136-18264725 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 306

Conread position: 2-385
Cow position: chr15:21636896-21637308 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-385
Cow position: chr15:22540192-22539803 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 138

Conread position: 2-385
Cow position: chr15:26591721-26591311 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-387
Cow position: chr15:44099-44503 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 203

Conread position: 2-388
Cow position: chr15:5983265-5983669 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 46

Conread position: 2-388
Cow position: chr15:6164466-6164063 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 2-388
Cow position: chr15:7941051-7941458 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 289

Conread position: 2-388
Cow position: chr15:10736183-10736607 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 295
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 159

Conread position: 2-388
Cow position: chr15:15344478-15344067 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 291

Conread position: 2-388
Cow position: chr15:33305161-33304756 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 111

Conread position: 2-388
Cow position: chr15:36619524-36619114 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 291
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 11

Conread position: 2-389
Cow position: chr15:609493-609075 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 283
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 119

Conread position: 2-389
Cow position: chr15:36623035-36622620 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 107

Conread position: 2-389
Cow position: chr15:51910909-51910495 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 139

Conread position: 2-390
Cow position: chr15:4641828-4642241 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position: chr15:5243405-5243012 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 2-390
Cow position: chr15:6589307-6588894 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 2-390
Cow position: chr15:7840959-7841360 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 2-390
Cow position: chr15:9522577-9522158 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 301

Conread position: 2-390
Cow position: chr15:12418083-12417674 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 140

Conread position: 2-390
Cow position: chr15:18579351-18579763 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-390
Cow position: chr15:37373499-37373086 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position: chr15:42939541-42939952 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 152

Conread position: 2-391
Cow position: chr15:38983285-38983703 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 299

Conread position: 3-240
Cow position: chr15:4388373-4388616 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-241
Cow position: chr15:8102082-8102321 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 159

Conread position: 4-371
Cow position: chr15:7267226-7267625 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 298

Conread position: 4-388
Cow position: chr15:38937411-38937807 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 106

Conread position: 4-388
Cow position: chr15:47201939-47201534 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 8-380
Cow position: chr15:14573672-14573278 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 276
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 83

Conread position: 17-377
Cow position: chr15:6463715-6464095 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 17-388
Cow position: chr15:50345090-50344695 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 280

Conread position: 23-389
Cow position: chr15:33455057-33455411 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 164

Conread position: 30-389
Cow position: chr15:1299000-1298615 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 270

Conread position: 54-388
Cow position: chr15:13076201-13076560 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 245

Conread position: 56-354
Cow position: chr15:39419172-39419476 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 57

Conread position: 69-367
Cow position: chr15:50308767-50308456 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 215

Conread position: 69-377
Cow position: chr15:32065592-32065261 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 226

Conread position: 71-390
Cow position: chr15:44364656-44364316 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 225

Conread position: 79-383
Cow position: chr15:21607483-21607810 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 129, 214

Conread position: 89-382
Cow position: chr15:45292054-45292353 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 127

Conread position: 90-388
Cow position: chr15:18062-18375 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 143, 26

Conread position: 92-383
Cow position: chr15:39091473-39091166 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 158

Conread position: 107-388
Cow position: chr15:44378257-44378558 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 162

Conread position: 115-381
Cow position: chr15:37382845-37382555 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 99, 179

Conread position: 120-367
Cow position: chr15:42597503-42597233 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 174

Conread position: 137-385
Cow position: chr15:43266872-43267143 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 157

Conread position: 145-388
Cow position: chr15:44260878-44260625 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 12, 137

Conread position: 173-387
Cow position: chr15:10242931-10243159 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 186

Conread position: 229-391
Cow position: chr15:30984450-30984612 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 236-385
Cow position: chr15:31768663-31768514 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 37

Conread position: 236-386
Cow position: chr15:22096181-22096028 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 75, 37

Conread position: 244-390
Cow position: chr15:4769396-4769545 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 31

Conread position: 247-388
Cow position: chr15:22855659-22855516 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 26

Conread position: 250-386
Cow position: chr15:7574701-7574839 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 23

Show alignments to all cow chromosomes.