Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-389
Cow position:
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 2-134
Cow position:
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 111

Conread position: 2-174
Cow position:
Alignm length: 179
Alignm identity: 143
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-179
Cow position:
Alignm length: 184
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 46, 0

Conread position: 2-180
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 144

Conread position: 2-193
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-197
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 98

Conread position: 2-202
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 131

Conread position: 2-237
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position:
Alignm length: 243
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position:
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-238
Cow position:
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position:
Alignm length: 241
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 84

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 108

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 62

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 204

Conread position: 2-240
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 45, 141

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 243
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 95

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 111

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 182
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 56, 127

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 210

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position:
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position:
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 226

Conread position: 2-245
Cow position:
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-262
Cow position:
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 160

Conread position: 2-351
Cow position:
Alignm length: 377
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 293

Conread position: 2-365
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 392
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 2-367
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 283
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 47, 122

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 196

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 197

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 294

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-367
Cow position:
Alignm length: 399
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 300

Conread position: 2-371
Cow position:
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-374
Cow position:
Alignm length: 392
Alignm identity: 264
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 42, 226

Conread position: 2-374
Cow position:
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 69

Conread position: 2-376
Cow position:
Alignm length: 398
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 47

Conread position: 2-377
Cow position:
Alignm length: 401
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-377
Cow position:
Alignm length: 402
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 2-379
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 131

Conread position: 2-381
Cow position:
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 21

Conread position: 2-382
Cow position:
Alignm length: 413
Alignm identity: 290
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 45, 87

Conread position: 2-383
Cow position:
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-383
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-383
Cow position:
Alignm length: 404
Alignm identity: 277
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 55, 161

Conread position: 2-385
Cow position:
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-385
Cow position:
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 390

Conread position: 2-385
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 306

Conread position: 2-385
Cow position:
Alignm length: 415
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-385
Cow position:
Alignm length: 400
Alignm identity: 271
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 138

Conread position: 2-385
Cow position:
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-387
Cow position:
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 203

Conread position: 2-388
Cow position:
Alignm length: 413
Alignm identity: 288
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 46

Conread position: 2-388
Cow position:
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 2-388
Cow position:
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 289

Conread position: 2-388
Cow position:
Alignm length: 428
Alignm identity: 295
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 47, 159

Conread position: 2-388
Cow position:
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 291

Conread position: 2-388
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 47, 111

Conread position: 2-388
Cow position:
Alignm length: 417
Alignm identity: 291
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 11

Conread position: 2-389
Cow position:
Alignm length: 420
Alignm identity: 283
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 119

Conread position: 2-389
Cow position:
Alignm length: 420
Alignm identity: 294
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 107

Conread position: 2-389
Cow position:
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 139

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position:
Alignm length: 403
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 168

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 2-390
Cow position:
Alignm length: 406
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 2-390
Cow position:
Alignm length: 422
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 301

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 140

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position:
Alignm length: 419
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 152

Conread position: 2-391
Cow position:
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 299

Conread position: 3-240
Cow position:
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-241
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 159

Conread position: 4-371
Cow position:
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 298

Conread position: 4-388
Cow position:
Alignm length: 405
Alignm identity: 273
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 24, 106

Conread position: 4-388
Cow position:
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 86

Conread position: 8-380
Cow position:
Alignm length: 400
Alignm identity: 276
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 83

Conread position: 17-377
Cow position:
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 17-388
Cow position:
Alignm length: 400
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 280

Conread position: 23-389
Cow position:
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 164

Conread position: 30-389
Cow position:
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 270

Conread position: 54-388
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 245

Conread position: 56-354
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 14, 57

Conread position: 69-367
Cow position:
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 215

Conread position: 69-377
Cow position:
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 226

Conread position: 71-390
Cow position:
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 225

Conread position: 79-383
Cow position:
Alignm length: 329
Alignm identity: 239
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 129, 214

Conread position: 89-382
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 87, 127

Conread position: 90-388
Cow position:
Alignm length: 322
Alignm identity: 230
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 143, 26

Conread position: 92-383
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 158

Conread position: 107-388
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 162

Conread position: 115-381
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 99, 179

Conread position: 120-367
Cow position:
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 174

Conread position: 137-385
Cow position:
Alignm length: 276
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 37, 157

Conread position: 145-388
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 12, 137

Conread position: 173-387
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 186

Conread position: 229-391
Cow position:
Alignm length: 163
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 236-385
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 75, 37

Conread position: 236-386
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 75, 37

Conread position: 244-390
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 31

Conread position: 247-388
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 26

Conread position: 250-386
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 23

Show alignments to all cow chromosomes.