Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-387
Cow position:
Alignm length: 406
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 29

Conread position: 1-388
Cow position:
Alignm length: 409
Alignm identity: 294
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 16

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 2-193
Cow position:
Alignm length: 198
Alignm identity: 160
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-205
Cow position:
Alignm length: 210
Alignm identity: 165
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 192

Conread position: 2-206
Cow position:
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 192

Conread position: 2-234
Cow position:
Alignm length: 239
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-234
Cow position:
Alignm length: 239
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-236
Cow position:
Alignm length: 241
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-239
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 78

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 240
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 59

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 183

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 124

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 129

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 97

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 170

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 58, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 141

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 97

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 105

Conread position: 2-363
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 289

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 308

Conread position: 2-367
Cow position:
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 89

Conread position: 2-375
Cow position:
Alignm length: 383
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 244

Conread position: 2-378
Cow position:
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 252

Conread position: 2-382
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 60

Conread position: 2-383
Cow position:
Alignm length: 414
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 299

Conread position: 2-383
Cow position:
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 186

Conread position: 2-384
Cow position:
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 64

Conread position: 2-385
Cow position:
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 2-385
Cow position:
Alignm length: 403
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 162

Conread position: 2-385
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 258

Conread position: 2-387
Cow position:
Alignm length: 403
Alignm identity: 272
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 30

Conread position: 2-388
Cow position:
Alignm length: 413
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-388
Cow position:
Alignm length: 409
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 197

Conread position: 2-388
Cow position:
Alignm length: 406
Alignm identity: 263
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 36

Conread position: 2-388
Cow position:
Alignm length: 414
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 142

Conread position: 2-388
Cow position:
Alignm length: 395
Alignm identity: 274
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 47, 124

Conread position: 2-389
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 195

Conread position: 2-389
Cow position:
Alignm length: 422
Alignm identity: 282
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 106

Conread position: 2-389
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-390
Cow position:
Alignm length: 414
Alignm identity: 281
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 47, 139

Conread position: 2-390
Cow position:
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 63

Conread position: 3-240
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 3-379
Cow position:
Alignm length: 402
Alignm identity: 273
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 168

Conread position: 4-183
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-367
Cow position:
Alignm length: 388
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 299

Conread position: 4-383
Cow position:
Alignm length: 410
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 105

Conread position: 7-240
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 169

Conread position: 26-367
Cow position:
Alignm length: 371
Alignm identity: 267
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 23, 232

Conread position: 55-385
Cow position:
Alignm length: 342
Alignm identity: 230
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 15, 116

Conread position: 62-388
Cow position:
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 229

Conread position: 69-367
Cow position:
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 109

Conread position: 74-385
Cow position:
Alignm length: 325
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 146, 107

Conread position: 89-361
Cow position:
Alignm length: 284
Alignm identity: 201
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 133

Conread position: 92-384
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 120, 27

Conread position: 123-367
Cow position:
Alignm length: 261
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 115, 52

Conread position: 126-385
Cow position:
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 185, 110

Conread position: 134-390
Cow position:
Alignm length: 280
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 69

Conread position: 149-384
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 139

Conread position: 170-390
Cow position:
Alignm length: 224
Alignm identity: 152
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 92, 14

Conread position: 226-388
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 79, 47

Conread position: 229-388
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 41

Conread position: 229-390
Cow position:
Alignm length: 165
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 44

Conread position: 236-366
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 236-377
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 238-375
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 35

Conread position: 244-388
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 29

Conread position: 250-386
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 33

Show alignments to all cow chromosomes.