Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 2-129
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 2-137
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 131

Conread position: 2-146
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-153
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 123

Conread position: 2-167
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 2-180
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-185
Cow position:
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 57

Conread position: 2-197
Cow position:
Alignm length: 202
Alignm identity: 152
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-213
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-218
Cow position:
Alignm length: 223
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 97

Conread position: 2-238
Cow position:
Alignm length: 243
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 2-240
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 198

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-252
Cow position:
Alignm length: 257
Alignm identity: 160
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 2-341
Cow position:
Alignm length: 360
Alignm identity: 249
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 84

Conread position: 2-364
Cow position:
Alignm length: 392
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 97

Conread position: 2-366
Cow position:
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 124

Conread position: 2-367
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 285

Conread position: 2-367
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 384
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 286

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position:
Alignm length: 381
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 283

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-373
Cow position:
Alignm length: 402
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-376
Cow position:
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 143

Conread position: 2-376
Cow position:
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 286

Conread position: 2-377
Cow position:
Alignm length: 406
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-382
Cow position:
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 102

Conread position: 2-385
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 268

Conread position: 2-388
Cow position:
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 65

Conread position: 2-389
Cow position:
Alignm length: 411
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 377

Conread position: 2-390
Cow position:
Alignm length: 412
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 199

Conread position: 3-213
Cow position:
Alignm length: 217
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 3-225
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 117

Conread position: 3-240
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 44, 108

Conread position: 4-240
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position:
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 179

Conread position: 4-367
Cow position:
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 6-368
Cow position:
Alignm length: 370
Alignm identity: 253
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 105

Conread position: 8-240
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 39, 140

Conread position: 18-388
Cow position:
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 187

Conread position: 23-383
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 329

Conread position: 59-377
Cow position:
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 18

Conread position: 59-388
Cow position:
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 11, 238

Conread position: 69-367
Cow position:
Alignm length: 317
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 208

Conread position: 69-383
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 149, 19

Conread position: 80-388
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 133, 22

Conread position: 127-388
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 168

Conread position: 136-388
Cow position:
Alignm length: 276
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 39

Conread position: 171-367
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 130

Conread position: 230-375
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 81, 43

Conread position: 230-375
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 81, 43

Conread position: 230-391
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 43

Conread position: 244-381
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 76, 29

Conread position: 247-383
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 255-383
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 18

Show alignments to all cow chromosomes.