Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-388
Cow position:
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 119

Conread position: 2-163
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 45, 121

Conread position: 2-177
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-181
Cow position:
Alignm length: 186
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 46, 105

Conread position: 2-189
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 2-189
Cow position:
Alignm length: 194
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 2-195
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 98

Conread position: 2-224
Cow position:
Alignm length: 229
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-229
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-235
Cow position:
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-235
Cow position:
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-237
Cow position:
Alignm length: 242
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 134

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 248
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 215

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 249
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 182

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 123

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 45, 166

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 2-242
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-246
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-247
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 226

Conread position: 2-253
Cow position:
Alignm length: 259
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 155

Conread position: 2-347
Cow position:
Alignm length: 367
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 248

Conread position: 2-366
Cow position:
Alignm length: 389
Alignm identity: 263
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 116

Conread position: 2-366
Cow position:
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 140

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 18

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 174

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position:
Alignm length: 392
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 307

Conread position: 2-367
Cow position:
Alignm length: 383
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 247

Conread position: 2-368
Cow position:
Alignm length: 389
Alignm identity: 264
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 18

Conread position: 2-374
Cow position:
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 395

Conread position: 2-377
Cow position:
Alignm length: 402
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 175

Conread position: 2-377
Cow position:
Alignm length: 403
Alignm identity: 263
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 86

Conread position: 2-380
Cow position:
Alignm length: 398
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 207

Conread position: 2-382
Cow position:
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 194

Conread position: 2-382
Cow position:
Alignm length: 406
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 293

Conread position: 2-383
Cow position:
Alignm length: 407
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 2-383
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 167

Conread position: 2-383
Cow position:
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 301

Conread position: 2-385
Cow position:
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 2-385
Cow position:
Alignm length: 413
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 297

Conread position: 2-387
Cow position:
Alignm length: 417
Alignm identity: 294
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 68, 47

Conread position: 2-388
Cow position:
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 285

Conread position: 2-388
Cow position:
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 107

Conread position: 2-388
Cow position:
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-388
Cow position:
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-389
Cow position:
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 289

Conread position: 2-390
Cow position:
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-390
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 395

Conread position: 2-391
Cow position:
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 33

Conread position: 3-211
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position:
Alignm length: 247
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position:
Alignm length: 240
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 82

Conread position: 3-388
Cow position:
Alignm length: 401
Alignm identity: 258
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 103

Conread position: 4-240
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 172

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 145

Conread position: 4-371
Cow position:
Alignm length: 398
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 145

Conread position: 4-388
Cow position:
Alignm length: 414
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 5-389
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 7-218
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 40, 164

Conread position: 7-240
Cow position:
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 8-385
Cow position:
Alignm length: 380
Alignm identity: 256
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 59

Conread position: 10-387
Cow position:
Alignm length: 406
Alignm identity: 285
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 107

Conread position: 15-367
Cow position:
Alignm length: 384
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 97

Conread position: 35-352
Cow position:
Alignm length: 341
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 258

Conread position: 62-390
Cow position:
Alignm length: 345
Alignm identity: 244
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 96

Conread position: 69-388
Cow position:
Alignm length: 344
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 32

Conread position: 76-383
Cow position:
Alignm length: 333
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 218

Conread position: 96-367
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 8

Conread position: 126-390
Cow position:
Alignm length: 266
Alignm identity: 198
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 116, 8

Conread position: 160-388
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 138

Conread position: 162-388
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 70, 132

Conread position: 173-383
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 120

Conread position: 179-383
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 100

Conread position: 179-391
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 29

Conread position: 244-388
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 29

Conread position: 245-385
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 30

Conread position: 246-388
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 28

Conread position: 247-367
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 26

Conread position: 250-375
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 23

Show alignments to all cow chromosomes.