Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 2-153
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 2-168
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 113

Conread position: 2-183
Cow position:
Alignm length: 188
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-191
Cow position:
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 56

Conread position: 2-202
Cow position:
Alignm length: 206
Alignm identity: 164
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 2-209
Cow position:
Alignm length: 213
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 2-213
Cow position:
Alignm length: 218
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-225
Cow position:
Alignm length: 230
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-231
Cow position:
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-234
Cow position:
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position:
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-239
Cow position:
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 203

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 54

Conread position: 2-240
Cow position:
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 97

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 93

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 150

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position:
Alignm length: 248
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position:
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position:
Alignm length: 248
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-244
Cow position:
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-247
Cow position:
Alignm length: 252
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-267
Cow position:
Alignm length: 274
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 149

Conread position: 2-287
Cow position:
Alignm length: 292
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-350
Cow position:
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 2-365
Cow position:
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-366
Cow position:
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 264
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 218

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 105

Conread position: 2-367
Cow position:
Alignm length: 378
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 166

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 174

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 174

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-367
Cow position:
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-371
Cow position:
Alignm length: 401
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 173

Conread position: 2-375
Cow position:
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 286

Conread position: 2-376
Cow position:
Alignm length: 413
Alignm identity: 283
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 24, 62

Conread position: 2-378
Cow position:
Alignm length: 387
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 86

Conread position: 2-378
Cow position:
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 299

Conread position: 2-383
Cow position:
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 23

Conread position: 2-383
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 169

Conread position: 2-385
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-387
Cow position:
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 110

Conread position: 2-387
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 137

Conread position: 2-387
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 295

Conread position: 2-388
Cow position:
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 2-388
Cow position:
Alignm length: 418
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 2-388
Cow position:
Alignm length: 418
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 102

Conread position: 2-388
Cow position:
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 2-388
Cow position:
Alignm length: 404
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 131

Conread position: 2-388
Cow position:
Alignm length: 410
Alignm identity: 272
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 34, 294

Conread position: 2-389
Cow position:
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 165

Conread position: 2-389
Cow position:
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 2-389
Cow position:
Alignm length: 413
Alignm identity: 279
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 49, 106

Conread position: 2-390
Cow position:
Alignm length: 419
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 298

Conread position: 2-390
Cow position:
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-390
Cow position:
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-390
Cow position:
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 385

Conread position: 2-390
Cow position:
Alignm length: 421
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 3-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 173

Conread position: 3-243
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 31

Conread position: 3-261
Cow position:
Alignm length: 265
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 3-391
Cow position:
Alignm length: 398
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 4-213
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 40, 154

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-384
Cow position:
Alignm length: 412
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 4-386
Cow position:
Alignm length: 398
Alignm identity: 272
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 31

Conread position: 4-387
Cow position:
Alignm length: 415
Alignm identity: 291
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 45, 110

Conread position: 6-182
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 6-206
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 101

Conread position: 8-231
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 172

Conread position: 13-240
Cow position:
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 13-388
Cow position:
Alignm length: 389
Alignm identity: 265
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 271

Conread position: 21-390
Cow position:
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 147

Conread position: 25-365
Cow position:
Alignm length: 371
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 67

Conread position: 36-388
Cow position:
Alignm length: 368
Alignm identity: 257
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 13, 132

Conread position: 59-383
Cow position:
Alignm length: 349
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 11, 40

Conread position: 59-388
Cow position:
Alignm length: 346
Alignm identity: 230
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 29

Conread position: 62-381
Cow position:
Alignm length: 328
Alignm identity: 213
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 64

Conread position: 69-367
Cow position:
Alignm length: 318
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 44

Conread position: 76-388
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 214

Conread position: 76-390
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 16, 67

Conread position: 87-377
Cow position:
Alignm length: 316
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 207

Conread position: 90-391
Cow position:
Alignm length: 310
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 177

Conread position: 103-388
Cow position:
Alignm length: 308
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 189

Conread position: 120-388
Cow position:
Alignm length: 294
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 174

Conread position: 120-388
Cow position:
Alignm length: 292
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 172

Conread position: 123-367
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 157

Conread position: 126-384
Cow position:
Alignm length: 281
Alignm identity: 209
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 92, 167

Conread position: 143-385
Cow position:
Alignm length: 267
Alignm identity: 198
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 89, 160

Conread position: 150-367
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 144

Conread position: 158-388
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 136

Conread position: 167-388
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 128

Conread position: 185-388
Cow position:
Alignm length: 220
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 100

Conread position: 189-387
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 125, 48

Conread position: 190-388
Cow position:
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 86

Conread position: 199-367
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 87

Conread position: 219-367
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 18

Conread position: 219-367
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 18

Conread position: 230-388
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 140, 79

Conread position: 236-382
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 236-389
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 75, 37

Conread position: 243-388
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 244-388
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 244-388
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 29

Conread position: 244-390
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 31

Conread position: 246-388
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 27

Conread position: 247-388
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 19

Conread position: 250-383
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 23

Conread position: 272-391
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.