Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-367
Cow position:
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 205

Conread position: 1-388
Cow position:
Alignm length: 414
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 297

Conread position: 1-390
Cow position:
Alignm length: 410
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 387

Conread position: 2-161
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 2-165
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 94

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-183
Cow position:
Alignm length: 188
Alignm identity: 147
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-194
Cow position:
Alignm length: 199
Alignm identity: 158
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 2-211
Cow position:
Alignm length: 216
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-212
Cow position:
Alignm length: 218
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 148

Conread position: 2-224
Cow position:
Alignm length: 225
Alignm identity: 164
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 247
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 106

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 197

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 241

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-328
Cow position:
Alignm length: 355
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 130

Conread position: 2-328
Cow position:
Alignm length: 352
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-365
Cow position:
Alignm length: 376
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 264

Conread position: 2-366
Cow position:
Alignm length: 371
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-386
Cow position:
Alignm length: 421
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-386
Cow position:
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 187

Conread position: 2-387
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-388
Cow position:
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-388
Cow position:
Alignm length: 403
Alignm identity: 270
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 47, 18

Conread position: 2-388
Cow position:
Alignm length: 418
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 246

Conread position: 2-389
Cow position:
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 292

Conread position: 2-390
Cow position:
Alignm length: 405
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 174

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-390
Cow position:
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 290

Conread position: 2-390
Cow position:
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 185

Conread position: 3-384
Cow position:
Alignm length: 385
Alignm identity: 258
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 67, 215

Conread position: 4-208
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 39, 0

Conread position: 4-240
Cow position:
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-388
Cow position:
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 151

Conread position: 8-388
Cow position:
Alignm length: 410
Alignm identity: 280
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 162

Conread position: 23-383
Cow position:
Alignm length: 382
Alignm identity: 262
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 47, 271

Conread position: 23-388
Cow position:
Alignm length: 393
Alignm identity: 270
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 26, 66

Conread position: 59-390
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 11, 73

Conread position: 69-366
Cow position:
Alignm length: 318
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 221

Conread position: 71-383
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 86, 144

Conread position: 112-388
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 73, 142

Conread position: 158-367
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 145

Conread position: 172-377
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 122

Conread position: 236-387
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 236-387
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 244-386
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 11, 31

Conread position: 246-367
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 65, 27

Conread position: 250-388
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 56, 24

Show alignments to all cow chromosomes.