Cow genome map
| Conread name: | rpfco0110_d5.y1 |
| Conread position: | 2-155 |
| Cow position: | chr26:21823620-21823469 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 67, 54 |
| Conread position: | 2-174 |
| Cow position: | chr26:1638031-1637853 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-175 |
| Cow position: | chr26:6426039-6426218 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-180 |
| Cow position: | chr26:4122673-4122857 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-193 |
| Cow position: | chr26:3199543-3199346 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-193 |
| Cow position: | chr26:3705649-3705844 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 2-194 |
| Cow position: | chr26:23590660-23590859 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-213 |
| Cow position: | chr26:18773259-18773042 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-219 |
| Cow position: | chr26:34014839-34015062 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 2-238 |
| Cow position: | chr26:4729318-4729077 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:1346989-1346745 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:1389989-1390231 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 2-240 |
| Cow position: | chr26:1620656-1620904 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:2349166-2348922 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:3230473-3230717 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:3537127-3537371 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:7506708-7506465 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 219 |
| Conread position: | 2-240 |
| Cow position: | chr26:8083831-8084075 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:8872849-8873095 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:9558876-9558631 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:12258775-12258533 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 153 |
| Conread position: | 2-240 |
| Cow position: | chr26:13183316-13183559 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 201 |
| Conread position: | 2-240 |
| Cow position: | chr26:14897006-14897250 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:18804358-18804121 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 2-240 |
| Cow position: | chr26:26285868-26286108 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 174 |
| Conread position: | 2-240 |
| Cow position: | chr26:27987583-27987341 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:28707053-28706809 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:30594624-30594380 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:34264969-34265213 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-240 |
| Cow position: | chr26:34272076-34272302 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 2-240 |
| Cow position: | chr26:35122236-35121993 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 97 |
| Conread position: | 2-240 |
| Cow position: | chr26:35561056-35560812 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-241 |
| Cow position: | chr26:5679535-5679780 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-241 |
| Cow position: | chr26:35191542-35191297 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-365 |
| Cow position: | chr26:12585533-12585141 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 298 |
| Conread position: | 2-366 |
| Cow position: | chr26:30586340-30585959 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 286 |
| Conread position: | 2-367 |
| Cow position: | chr26:13807021-13806628 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 2-367 |
| Cow position: | chr26:22691395-22691789 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 298 |
| Conread position: | 2-377 |
| Cow position: | chr26:1885011-1885421 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 2-381 |
| Cow position: | chr26:4324688-4324300 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 59 |
| Conread position: | 2-383 |
| Cow position: | chr26:8809885-8810274 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 65 |
| Conread position: | 2-383 |
| Cow position: | chr26:11362665-11362269 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 291 |
| Conread position: | 2-385 |
| Cow position: | chr26:4440748-4440350 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 117 |
| Conread position: | 2-388 |
| Cow position: | chr26:14173085-14173484 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 2-390 |
| Cow position: | chr26:20496535-20496951 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 336 |
| Conread position: | 3-240 |
| Cow position: | chr26:9115043-9115288 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 155 |
| Conread position: | 4-371 |
| Cow position: | chr26:23889417-23889816 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 258 |
| Conread position: | 4-385 |
| Cow position: | chr26:2201541-2201944 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 4-389 |
| Cow position: | chr26:22660269-22659871 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 326 |
| Conread position: | 5-388 |
| Cow position: | chr26:14488246-14487840 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 127 |
| Conread position: | 8-240 |
| Cow position: | chr26:9841391-9841149 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 40, 147 |
| Conread position: | 13-388 |
| Cow position: | chr26:11269246-11269642 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 279 |
| Conread position: | 69-382 |
| Cow position: | chr26:21012207-21012533 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 173, 34 |
| Conread position: | 69-383 |
| Cow position: | chr26:16508158-16508482 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 79-367 |
| Cow position: | chr26:8739328-8739018 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 115, 28 |
| Conread position: | 120-387 |
| Cow position: | chr26:386809-387100 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 87, 183 |
| Conread position: | 122-388 |
| Cow position: | chr26:6038551-6038273 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 160 |
| Conread position: | 132-367 |
| Cow position: | chr26:15199169-15199426 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 74, 162 |
| Conread position: | 142-386 |
| Cow position: | chr26:20255783-20256044 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 100, 36 |
| Conread position: | 158-378 |
| Cow position: | chr26:3556931-3556701 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 84, 45 |
| Conread position: | 168-387 |
| Cow position: | chr26:13773230-13773472 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 124 |
| Conread position: | 229-367 |
| Cow position: | chr26:17169089-17169229 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 236-385 |
| Cow position: | chr26:29433498-29433648 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 37 |
Show alignments to all cow chromosomes.