Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-152
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 2-180
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 110

Conread position: 2-182
Cow position:
Alignm length: 187
Alignm identity: 150
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 2-188
Cow position:
Alignm length: 193
Alignm identity: 158
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 2-210
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 79

Conread position: 2-228
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position:
Alignm length: 243
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 117

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 215

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 114

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 239
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 171

Conread position: 2-240
Cow position:
Alignm length: 242
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 152

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 140

Conread position: 2-255
Cow position:
Alignm length: 260
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 258

Conread position: 2-367
Cow position:
Alignm length: 395
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-367
Cow position:
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position:
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-376
Cow position:
Alignm length: 404
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 178

Conread position: 2-378
Cow position:
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-383
Cow position:
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 91

Conread position: 2-383
Cow position:
Alignm length: 409
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 294

Conread position: 2-383
Cow position:
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 47

Conread position: 2-385
Cow position:
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 259

Conread position: 2-388
Cow position:
Alignm length: 414
Alignm identity: 288
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 45, 106

Conread position: 2-388
Cow position:
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-390
Cow position:
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 291

Conread position: 2-390
Cow position:
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 12

Conread position: 2-391
Cow position:
Alignm length: 397
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 115

Conread position: 3-184
Cow position:
Alignm length: 189
Alignm identity: 153
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 46, 78

Conread position: 10-388
Cow position:
Alignm length: 400
Alignm identity: 265
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 166

Conread position: 17-367
Cow position:
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 146

Conread position: 19-388
Cow position:
Alignm length: 384
Alignm identity: 252
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 88

Conread position: 21-387
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 104

Conread position: 28-385
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 82

Conread position: 28-389
Cow position:
Alignm length: 390
Alignm identity: 272
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 98

Conread position: 29-368
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 271

Conread position: 53-366
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 31

Conread position: 59-388
Cow position:
Alignm length: 341
Alignm identity: 228
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 125

Conread position: 80-388
Cow position:
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 165

Conread position: 87-367
Cow position:
Alignm length: 294
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 196

Conread position: 95-390
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 197

Conread position: 138-388
Cow position:
Alignm length: 258
Alignm identity: 193
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 107, 139

Conread position: 151-388
Cow position:
Alignm length: 259
Alignm identity: 194
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 88, 139

Conread position: 173-366
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 69, 39

Conread position: 229-388
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 44

Conread position: 236-383
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 236-383
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 75, 37

Conread position: 236-388
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 236-390
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 75, 34

Conread position: 236-390
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 37

Conread position: 238-390
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 38

Conread position: 246-367
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 27

Conread position: 246-383
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 66, 27

Show alignments to all cow chromosomes.