Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-240
Cow position:
Alignm length: 246
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-252
Cow position:
Alignm length: 258
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 46, 249

Conread position: 1-367
Cow position:
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 293

Conread position: 1-383
Cow position:
Alignm length: 402
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 2-131
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-139
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 2-153
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 2-161
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-185
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 2-193
Cow position:
Alignm length: 201
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 46, 134

Conread position: 2-195
Cow position:
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 47, 153

Conread position: 2-217
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 211

Conread position: 2-225
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 68, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 33

Conread position: 2-240
Cow position:
Alignm length: 259
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 114

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 188

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 131

Conread position: 2-240
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 198

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 246
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 87

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 118

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position:
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-357
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 157

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position:
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 258

Conread position: 2-367
Cow position:
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 38

Conread position: 2-367
Cow position:
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-371
Cow position:
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 116

Conread position: 2-371
Cow position:
Alignm length: 400
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-376
Cow position:
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-380
Cow position:
Alignm length: 401
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 2-382
Cow position:
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-384
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 396

Conread position: 2-385
Cow position:
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 395

Conread position: 2-385
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-386
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 24

Conread position: 2-388
Cow position:
Alignm length: 413
Alignm identity: 284
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 182, 47

Conread position: 2-388
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-388
Cow position:
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 292

Conread position: 2-388
Cow position:
Alignm length: 412
Alignm identity: 278
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 44, 7

Conread position: 2-388
Cow position:
Alignm length: 411
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 2-388
Cow position:
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 18

Conread position: 2-388
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 123

Conread position: 2-388
Cow position:
Alignm length: 410
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 184

Conread position: 2-390
Cow position:
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 136

Conread position: 2-390
Cow position:
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 162

Conread position: 2-390
Cow position:
Alignm length: 416
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 151

Conread position: 2-390
Cow position:
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 247

Conread position: 2-390
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 46, 105

Conread position: 2-390
Cow position:
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 35

Conread position: 2-390
Cow position:
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 256

Conread position: 3-240
Cow position:
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 3-240
Cow position:
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 4-388
Cow position:
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 4-388
Cow position:
Alignm length: 408
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 39

Conread position: 6-389
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 290

Conread position: 8-366
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 284

Conread position: 13-391
Cow position:
Alignm length: 395
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 113

Conread position: 17-377
Cow position:
Alignm length: 372
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 239

Conread position: 59-390
Cow position:
Alignm length: 358
Alignm identity: 259
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 11, 43

Conread position: 62-388
Cow position:
Alignm length: 341
Alignm identity: 227
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 49

Conread position: 122-388
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 173

Conread position: 129-367
Cow position:
Alignm length: 262
Alignm identity: 197
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 103, 164

Conread position: 133-390
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 99, 161

Conread position: 146-383
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 138

Conread position: 149-383
Cow position:
Alignm length: 260
Alignm identity: 196
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 80, 142

Conread position: 150-389
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 142

Conread position: 162-367
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 125

Conread position: 176-385
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 118

Conread position: 236-390
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 36

Conread position: 247-388
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 26

Show alignments to all cow chromosomes.