Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 2-139
Cow position: chr9:43845490-43845634 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-140
Cow position: chr9:8283344-8283200 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 2-160
Cow position: chr9:9094371-9094535 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-167
Cow position: chr9:43579764-43579935 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-174
Cow position: chr9:50003312-50003490 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-181
Cow position: chr9:3052118-3051933 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position: chr9:26081452-26081271 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 152
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 45, 105

Conread position: 2-186
Cow position: chr9:43493808-43493998 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-192
Cow position: chr9:41506982-41506786 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 157
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 2-208
Cow position: chr9:30737538-30737750 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 167
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 2-211
Cow position: chr9:6304509-6304294 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-211
Cow position: chr9:34696109-34696333 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 177
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 85

Conread position: 2-227
Cow position: chr9:26575703-26575932 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 47, 157

Conread position: 2-238
Cow position: chr9:10567502-10567259 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:218251-218008 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:777950-777705 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:1249133-1248889 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:2495877-2495633 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:2681417-2681660 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position: chr9:2873338-2873582 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:3061455-3061695 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-240
Cow position: chr9:3997894-3997652 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 187
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 45, 118

Conread position: 2-240
Cow position: chr9:5006845-5007081 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 66

Conread position: 2-240
Cow position: chr9:5430331-5430574 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 163

Conread position: 2-240
Cow position: chr9:5452776-5452532 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:6550041-6550285 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:6708053-6707810 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 79

Conread position: 2-240
Cow position: chr9:7104367-7104123 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:9015938-9016182 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:10856884-10857128 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:13312429-13312671 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 116

Conread position: 2-240
Cow position: chr9:14045538-14045781 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 105

Conread position: 2-240
Cow position: chr9:17017618-17017862 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:18506960-18506716 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:19156429-19156184 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:20941338-20941580 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-240
Cow position: chr9:22569969-22570213 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:24423185-24423429 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:24918424-24918180 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:26325610-26325854 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:27037972-27038215 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 177

Conread position: 2-240
Cow position: chr9:28024683-28024927 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:28785206-28785452 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:30674939-30675183 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:31417651-31417408 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 129

Conread position: 2-240
Cow position: chr9:32972231-32972475 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position: chr9:34059769-34059525 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:37158746-37158502 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:37174541-37174297 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:37253268-37253512 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:38633644-38633887 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 212

Conread position: 2-240
Cow position: chr9:39303689-39303445 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:39813179-39813424 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:40143480-40143243 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 128

Conread position: 2-240
Cow position: chr9:41313177-41312933 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:43225837-43225593 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:43495998-43496242 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:45791712-45791956 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:45876381-45876626 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:47044811-47045055 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:47170912-47171161 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:52401823-52402067 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:52526015-52526259 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:53776565-53776801 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 45, 107

Conread position: 2-240
Cow position: chr9:56176634-56176878 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr9:64012365-64012121 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position: chr9:42570080-42570325 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 2-247
Cow position: chr9:62734292-62734046 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 87

Conread position: 2-312
Cow position: chr9:31114027-31114322 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 42

Conread position: 2-351
Cow position: chr9:2484752-2484381 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 329

Conread position: 2-366
Cow position: chr9:2527152-2527537 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 174

Conread position: 2-366
Cow position: chr9:2856708-2857100 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr9:4940634-4940241 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr9:10939588-10939972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 179

Conread position: 2-367
Cow position: chr9:18539527-18539915 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-367
Cow position: chr9:22655676-22656056 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 2-367
Cow position: chr9:28658185-28657799 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 182

Conread position: 2-367
Cow position: chr9:44203216-44202822 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 2-367
Cow position: chr9:46667936-46667540 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 300

Conread position: 2-368
Cow position: chr9:1998431-1998042 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 2-368
Cow position: chr9:10679061-10678671 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 2-368
Cow position: chr9:33477765-33478150 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 2-368
Cow position: chr9:51010431-51010812 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 140

Conread position: 2-373
Cow position: chr9:54459638-54459239 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-377
Cow position: chr9:1099458-1099861 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-377
Cow position: chr9:14002904-14003296 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 384

Conread position: 2-377
Cow position: chr9:46627175-46627578 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-377
Cow position: chr9:55031379-55031771 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 2-378
Cow position: chr9:13180786-13181184 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 107

Conread position: 2-382
Cow position: chr9:3075025-3075413 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 133, 18

Conread position: 2-382
Cow position: chr9:5534048-5533664 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 143

Conread position: 2-383
Cow position: chr9:20988169-20988570 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 283
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 128

Conread position: 2-383
Cow position: chr9:26054910-26055304 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 323

Conread position: 2-383
Cow position: chr9:30139742-30139341 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 42

Conread position: 2-383
Cow position: chr9:46669821-46670203 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 223

Conread position: 2-384
Cow position: chr9:1939168-1938759 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 2-385
Cow position: chr9:1404675-1405082 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 278
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 45, 148

Conread position: 2-385
Cow position: chr9:15053016-15052614 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 117

Conread position: 2-385
Cow position: chr9:26280705-26281110 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 47

Conread position: 2-385
Cow position: chr9:48795428-48795017 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-386
Cow position: chr9:6886460-6886854 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 2-387
Cow position: chr9:6329531-6329129 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 275
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 65

Conread position: 2-387
Cow position: chr9:33068631-33068222 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 46, 301

Conread position: 2-387
Cow position: chr9:64049139-64049548 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 66

Conread position: 2-388
Cow position: chr9:1850750-1850372 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 56, 140

Conread position: 2-388
Cow position: chr9:3388936-3388546 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 2-388
Cow position: chr9:12260500-12260085 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-388
Cow position: chr9:13220407-13220817 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 157

Conread position: 2-388
Cow position: chr9:13472697-13472297 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 2-388
Cow position: chr9:17303109-17302700 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 293

Conread position: 2-388
Cow position: chr9:21412176-21412577 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 300

Conread position: 2-388
Cow position: chr9:22319549-22319136 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 18

Conread position: 2-388
Cow position: chr9:28774378-28773988 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 47, 191

Conread position: 2-388
Cow position: chr9:30401150-30401562 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 20

Conread position: 2-390
Cow position: chr9:3756967-3756559 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 387

Conread position: 2-390
Cow position: chr9:6252432-6252844 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 391

Conread position: 2-390
Cow position: chr9:12161472-12161872 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 266
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 287

Conread position: 2-390
Cow position: chr9:16178451-16178864 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 392

Conread position: 2-390
Cow position: chr9:59479984-59479577 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 386

Conread position: 3-240
Cow position: chr9:6365242-6365485 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position: chr9:38678993-38679226 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 3-344
Cow position: chr9:2190111-2190483 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 302

Conread position: 3-388
Cow position: chr9:3806463-3806874 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 32

Conread position: 4-240
Cow position: chr9:1071418-1071176 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-247
Cow position: chr9:2173401-2173647 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 160

Conread position: 4-367
Cow position: chr9:50840299-50840690 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 148

Conread position: 5-240
Cow position: chr9:44168456-44168697 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 7-144
Cow position: chr9:11157493-11157352 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 100

Conread position: 13-225
Cow position: chr9:44820641-44820847 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 172
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 34, 70

Conread position: 13-228
Cow position: chr9:6549394-6549615 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 13-384
Cow position: chr9:60460620-60460244 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 251
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 79

Conread position: 13-388
Cow position: chr9:37097496-37097883 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 151

Conread position: 13-389
Cow position: chr9:3729923-3730294 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 187

Conread position: 17-388
Cow position: chr9:29193689-29193290 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 281

Conread position: 19-368
Cow position: chr9:21461356-21461721 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 232

Conread position: 29-383
Cow position: chr9:52002215-52001835 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 85

Conread position: 59-240
Cow position: chr9:62130965-62131146 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 106

Conread position: 69-367
Cow position: chr9:34238822-34238501 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 234
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 119, 225

Conread position: 69-385
Cow position: chr9:17061419-17061083 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 37

Conread position: 71-367
Cow position: chr9:33843263-33843581 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 132, 62

Conread position: 75-383
Cow position: chr9:20409327-20409643 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 0

Conread position: 75-389
Cow position: chr9:1519540-1519867 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 117, 20

Conread position: 88-389
Cow position: chr9:55797147-55796826 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 151, 46

Conread position: 108-367
Cow position: chr9:19545487-19545768 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 98, 146

Conread position: 117-367
Cow position: chr9:4673047-4673313 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 80, 130

Conread position: 128-367
Cow position: chr9:8282272-8282012 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 108, 164

Conread position: 128-390
Cow position: chr9:22803656-22803371 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 68, 176

Conread position: 129-389
Cow position: chr9:23029020-23028750 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 105

Conread position: 149-384
Cow position: chr9:34917636-34917893 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 145

Conread position: 154-386
Cow position: chr9:8738610-8738370 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 10

Conread position: 156-383
Cow position: chr9:49981528-49981776 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 139

Conread position: 178-385
Cow position: chr9:1983421-1983646 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 109

Conread position: 230-375
Cow position: chr9:33056901-33057049 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 43

Conread position: 234-367
Cow position: chr9:12378571-12378706 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 77, 39

Conread position: 236-367
Cow position: chr9:1307227-1307094 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 236-385
Cow position: chr9:34690405-34690255 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 75, 37

Conread position: 236-389
Cow position: chr9:25548029-25547874 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 37

Conread position: 238-367
Cow position: chr9:14386705-14386835 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 73, 10

Conread position: 244-390
Cow position: chr9:36621854-36622003 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 67, 37

Conread position: 246-377
Cow position: chr9:50900501-50900369 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 36

Conread position: 247-389
Cow position: chr9:44821021-44821164 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 66, 26

Show alignments to all cow chromosomes.