Cow genome map
Conread name: | rpfco0113_l5.y1 |
Conread position: | 1-272 |
Cow position: | chr11:68422828-68423137 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 224 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 66, 117 |
Conread position: | 1-297 |
Cow position: | chr11:29802813-29802492 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 222 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 59, 279 |
Conread position: | 2-302 |
Cow position: | chr11:2394301-2393985 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 217 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 68, 259 |
Conread position: | 3-287 |
Cow position: | chr11:25861801-25861518 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 190 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 182, 74 |
Conread position: | 41-302 |
Cow position: | chr11:53445612-53445876 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 180 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 50, 31 |
Conread position: | 59-302 |
Cow position: | chr11:14941757-14941506 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 175 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 22, 122 |
Conread position: | 73-302 |
Cow position: | chr11:75255278-75255508 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 159 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 54, 100 |
Conread position: | 76-274 |
Cow position: | chr11:64589432-64589230 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 142 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 11, 148 |
Conread position: | 81-302 |
Cow position: | chr11:47566062-47565833 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 158 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 20, 26 |
Conread position: | 86-298 |
Cow position: | chr11:46485195-46485418 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 50, 151 |
Conread position: | 90-302 |
Cow position: | chr11:63508289-63508515 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 168 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 37, 91 |
Conread position: | 99-302 |
Cow position: | chr11:65988114-65988328 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 109-296 |
Cow position: | chr11:57831651-57831465 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 137 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 50, 9 |
Conread position: | 136-302 |
Cow position: | chr11:23047825-23047660 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 118 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 136-302 |
Cow position: | chr11:73499260-73499091 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 132 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 137-287 |
Cow position: | chr11:47169083-47168927 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 29, 83 |
Conread position: | 137-302 |
Cow position: | chr11:38667894-38667721 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 128 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 142-275 |
Cow position: | chr11:45889901-45890036 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 150-302 |
Cow position: | chr11:76392070-76391917 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 151-300 |
Cow position: | chr11:17452183-17452335 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 155-263 |
Cow position: | chr11:4609886-4609776 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 155-301 |
Cow position: | chr11:21473164-21473020 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 28, 98 |
Conread position: | 155-301 |
Cow position: | chr11:46705585-46705437 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 27, 46 |
Conread position: | 155-302 |
Cow position: | chr11:12949992-12949845 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 26, 109 |
Conread position: | 155-302 |
Cow position: | chr11:20491524-20491672 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 25, 93 |
Conread position: | 155-302 |
Cow position: | chr11:27681452-27681605 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 113 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 155-302 |
Cow position: | chr11:31894228-31894376 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 110 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 30, 18 |
Conread position: | 155-302 |
Cow position: | chr11:56892772-56892920 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 30, 143 |
Conread position: | 155-302 |
Cow position: | chr11:72082660-72082808 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 26, 13 |
Conread position: | 158-275 |
Cow position: | chr11:31575956-31576076 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 158-300 |
Cow position: | chr11:1596499-1596356 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 25, 83 |
Conread position: | 158-302 |
Cow position: | chr11:8828674-8828528 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 158-302 |
Cow position: | chr11:60137649-60137794 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 108 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 27, 88 |
Conread position: | 159-275 |
Cow position: | chr11:41104378-41104260 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 159-302 |
Cow position: | chr11:17151631-17151775 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 26, 37 |
Conread position: | 159-302 |
Cow position: | chr11:40275645-40275497 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 26, 15 |
Conread position: | 159-302 |
Cow position: | chr11:40279137-40278989 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 26, 15 |
Conread position: | 159-302 |
Cow position: | chr11:53452390-53452245 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 160-301 |
Cow position: | chr11:42519694-42519836 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 23, 108 |
Conread position: | 160-302 |
Cow position: | chr11:7001974-7001825 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 160-302 |
Cow position: | chr11:67236358-67236504 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 163-302 |
Cow position: | chr11:16000888-16001030 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 163-302 |
Cow position: | chr11:52832758-52832617 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 169-289 |
Cow position: | chr11:7612694-7612574 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 184-302 |
Cow position: | chr11:34642247-34642129 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.