Cow genome map

Conread name: rpfco0113_l5.y1

Conread position: 1-272
Cow position: chr11:68422828-68423137 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 224
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 117

Conread position: 1-297
Cow position: chr11:29802813-29802492 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 279

Conread position: 2-302
Cow position: chr11:2394301-2393985 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 68, 259

Conread position: 3-287
Cow position: chr11:25861801-25861518 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 182, 74

Conread position: 41-302
Cow position: chr11:53445612-53445876 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 31

Conread position: 59-302
Cow position: chr11:14941757-14941506 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 122

Conread position: 73-302
Cow position: chr11:75255278-75255508 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 54, 100

Conread position: 76-274
Cow position: chr11:64589432-64589230 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 148

Conread position: 81-302
Cow position: chr11:47566062-47565833 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 26

Conread position: 86-298
Cow position: chr11:46485195-46485418 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 151

Conread position: 90-302
Cow position: chr11:63508289-63508515 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 91

Conread position: 99-302
Cow position: chr11:65988114-65988328 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 109-296
Cow position: chr11:57831651-57831465 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 50, 9

Conread position: 136-302
Cow position: chr11:23047825-23047660 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 136-302
Cow position: chr11:73499260-73499091 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 23, 0

Conread position: 137-287
Cow position: chr11:47169083-47168927 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 83

Conread position: 137-302
Cow position: chr11:38667894-38667721 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 142-275
Cow position: chr11:45889901-45890036 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 150-302
Cow position: chr11:76392070-76391917 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 151-300
Cow position: chr11:17452183-17452335 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 155-263
Cow position: chr11:4609886-4609776 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 155-301
Cow position: chr11:21473164-21473020 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 98

Conread position: 155-301
Cow position: chr11:46705585-46705437 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 27, 46

Conread position: 155-302
Cow position: chr11:12949992-12949845 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 109

Conread position: 155-302
Cow position: chr11:20491524-20491672 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 93

Conread position: 155-302
Cow position: chr11:27681452-27681605 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 155-302
Cow position: chr11:31894228-31894376 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 18

Conread position: 155-302
Cow position: chr11:56892772-56892920 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 143

Conread position: 155-302
Cow position: chr11:72082660-72082808 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 13

Conread position: 158-275
Cow position: chr11:31575956-31576076 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 158-300
Cow position: chr11:1596499-1596356 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 25, 83

Conread position: 158-302
Cow position: chr11:8828674-8828528 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 158-302
Cow position: chr11:60137649-60137794 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 88

Conread position: 159-275
Cow position: chr11:41104378-41104260 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 159-302
Cow position: chr11:17151631-17151775 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 26, 37

Conread position: 159-302
Cow position: chr11:40275645-40275497 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 15

Conread position: 159-302
Cow position: chr11:40279137-40278989 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 15

Conread position: 159-302
Cow position: chr11:53452390-53452245 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 160-301
Cow position: chr11:42519694-42519836 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 108

Conread position: 160-302
Cow position: chr11:7001974-7001825 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 160-302
Cow position: chr11:67236358-67236504 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 163-302
Cow position: chr11:16000888-16001030 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 163-302
Cow position: chr11:52832758-52832617 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 11

Conread position: 169-289
Cow position: chr11:7612694-7612574 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 184-302
Cow position: chr11:34642247-34642129 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.