Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 57-302 |
| Cow position: | chr12:30064750-30065018 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 24, 260 |
| Conread position: | 73-275 |
| Cow position: | chr12:35718239-35718032 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 73-287 |
| Cow position: | chr12:35984957-35985173 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 73-302 |
| Cow position: | chr12:5797722-5797481 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 132-301 |
| Cow position: | chr12:47063961-47063795 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 137-273 |
| Cow position: | chr12:14523843-14523986 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 137-302 |
| Cow position: | chr12:45541634-45541791 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 155-301 |
| Cow position: | chr12:17262786-17262934 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 158-300 |
| Cow position: | chr12:24204373-24204231 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 24 |
| Conread position: | 158-302 |
| Cow position: | chr12:14325332-14325189 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 112 |
| Conread position: | 158-302 |
| Cow position: | chr12:27055540-27055689 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 117 |
| Conread position: | 158-302 |
| Cow position: | chr12:44057454-44057598 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 159-274 |
| Cow position: | chr12:38484455-38484338 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 159-302 |
| Cow position: | chr12:31528921-31528772 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 160-302 |
| Cow position: | chr12:1223405-1223262 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 135 |
| Conread position: | 161-298 |
| Cow position: | chr12:3757106-3756968 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 86 |
| Conread position: | 161-302 |
| Cow position: | chr12:25312432-25312290 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 24, 108 |
| Conread position: | 162-302 |
| Cow position: | chr12:18093831-18093973 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 98 |
| Conread position: | 166-302 |
| Cow position: | chr12:14855757-14855894 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 182-302 |
| Cow position: | chr12:39754246-39754366 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.