Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 1-297 |
| Cow position: | chr13:11290601-11290914 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 128 |
| Conread position: | 1-302 |
| Cow position: | chr13:14220688-14220360 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 59, 111 |
| Conread position: | 1-302 |
| Cow position: | chr13:32904952-32904642 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 54-298 |
| Cow position: | chr13:23816609-23816844 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 74-296 |
| Cow position: | chr13:2302716-2302943 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 51, 199 |
| Conread position: | 99-297 |
| Cow position: | chr13:33975498-33975299 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 107-301 |
| Cow position: | chr13:12521712-12521914 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 129-302 |
| Cow position: | chr13:26508515-26508347 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 137-302 |
| Cow position: | chr13:18551038-18550868 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 138-302 |
| Cow position: | chr13:40417927-40418089 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 155-268 |
| Cow position: | chr13:54471025-54470910 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 155-302 |
| Cow position: | chr13:46430289-46430440 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 138 |
| Conread position: | 155-302 |
| Cow position: | chr13:52966887-52966741 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 92 |
| Conread position: | 155-302 |
| Cow position: | chr13:54969788-54969942 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 30, 61 |
| Conread position: | 155-302 |
| Cow position: | chr13:58348095-58347949 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 58 |
| Conread position: | 157-302 |
| Cow position: | chr13:50739180-50739032 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 158-275 |
| Cow position: | chr13:6894046-6893928 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 158-302 |
| Cow position: | chr13:17346819-17346673 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 158-302 |
| Cow position: | chr13:34761689-34761548 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 8 |
| Conread position: | 158-302 |
| Cow position: | chr13:46353509-46353650 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 159-264 |
| Cow position: | chr13:54695906-54696012 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 87 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 159-301 |
| Cow position: | chr13:14099103-14099247 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 159-302 |
| Cow position: | chr13:7010480-7010336 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 159-302 |
| Cow position: | chr13:9803079-9802931 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 159-302 |
| Cow position: | chr13:22075682-22075534 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 159-302 |
| Cow position: | chr13:30271331-30271187 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 136 |
| Conread position: | 159-302 |
| Cow position: | chr13:46284605-46284745 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 54 |
| Conread position: | 160-302 |
| Cow position: | chr13:38898235-38898376 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 105 |
| Conread position: | 163-300 |
| Cow position: | chr13:33955021-33955160 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 163-302 |
| Cow position: | chr13:22886985-22887126 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 166-273 |
| Cow position: | chr13:18350837-18350728 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 167-302 |
| Cow position: | chr13:17991657-17991522 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 168-302 |
| Cow position: | chr13:661641-661773 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 173-302 |
| Cow position: | chr13:20156478-20156350 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 180-302 |
| Cow position: | chr13:32167326-32167447 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
Show alignments to all cow chromosomes.