Cow genome map


           Conread name:
           rpfco0113_l5.y1
        

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 128
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 111
               

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               54-298
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               74-296
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 199
               

               Conread position:
               99-297
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               66, 16
               

               Conread position:
               107-301
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               19, 8
               

               Conread position:
               129-302
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               137-302
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               138-302
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               155-268
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 138
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               30, 92
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               31, 58
               

               Conread position:
               157-302
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               158-275
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               158-302
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               24, 13
               

               Conread position:
               158-302
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               158-302
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               159-264
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               159-301
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               159-302
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               159-302
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               159-302
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               159-302
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 136
               

               Conread position:
               159-302
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               160-302
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 105
               

               Conread position:
               163-300
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               163-302
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               166-273
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               167-302
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               168-302
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 105
               

               Conread position:
               173-302
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               180-302
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               97, 0
               
Show alignments to all cow chromosomes.