Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 2-127 |
| Cow position: | chr16:26134577-26134454 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 73-275 |
| Cow position: | chr16:9845849-9845645 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 29, 16 |
| Conread position: | 73-302 |
| Cow position: | chr16:15320606-15320361 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 188 |
| Conread position: | 73-302 |
| Cow position: | chr16:28267152-28266908 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 54, 208 |
| Conread position: | 80-302 |
| Cow position: | chr16:44898862-44898633 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 193 |
| Conread position: | 82-296 |
| Cow position: | chr16:21095616-21095390 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 92 |
| Conread position: | 94-275 |
| Cow position: | chr16:11153281-11153096 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 137-296 |
| Cow position: | chr16:51880046-51879887 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 137-298 |
| Cow position: | chr16:18949550-18949712 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 137-298 |
| Cow position: | chr16:36537975-36538138 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 111 |
| Conread position: | 141-301 |
| Cow position: | chr16:2619024-2618866 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 155-302 |
| Cow position: | chr16:43082262-43082117 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 116 |
| Conread position: | 155-302 |
| Cow position: | chr16:52222356-52222209 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 140 |
| Conread position: | 158-300 |
| Cow position: | chr16:26156164-26156022 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 27, 102 |
| Conread position: | 158-302 |
| Cow position: | chr16:16546048-16546195 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 158-302 |
| Cow position: | chr16:18427160-18427306 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 158-302 |
| Cow position: | chr16:47368735-47368880 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 76 |
| Conread position: | 158-302 |
| Cow position: | chr16:53420317-53420460 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 15, 107 |
| Conread position: | 159-302 |
| Cow position: | chr16:10303772-10303628 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 24, 55 |
| Conread position: | 159-302 |
| Cow position: | chr16:19976944-19977086 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 160-298 |
| Cow position: | chr16:49580056-49580190 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 61 |
| Conread position: | 160-300 |
| Cow position: | chr16:11662011-11662153 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 185-302 |
| Cow position: | chr16:9510869-9510752 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.