Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 1-302 |
| Cow position: | chr17:9748577-9748906 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 2-302 |
| Cow position: | chr17:30236033-30236355 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 67, 175 |
| Conread position: | 64-300 |
| Cow position: | chr17:32457647-32457409 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 76-302 |
| Cow position: | chr17:39012649-39012880 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 17 |
| Conread position: | 79-302 |
| Cow position: | chr17:1455997-1455780 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 80-284 |
| Cow position: | chr17:27505034-27505240 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 97-275 |
| Cow position: | chr17:40854795-40854985 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 107-298 |
| Cow position: | chr17:9778600-9778802 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 123 |
| Conread position: | 136-302 |
| Cow position: | chr17:15634891-15634723 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 137-298 |
| Cow position: | chr17:24339164-24339326 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 137-300 |
| Cow position: | chr17:9060157-9059989 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 137-302 |
| Cow position: | chr17:7595146-7595312 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 155-301 |
| Cow position: | chr17:33903909-33903762 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 155-302 |
| Cow position: | chr17:4085768-4085917 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 155-302 |
| Cow position: | chr17:24880753-24880902 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 155-302 |
| Cow position: | chr17:25707969-25708118 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 155-302 |
| Cow position: | chr17:26614719-26614571 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 110 |
| Conread position: | 155-302 |
| Cow position: | chr17:34864584-34864730 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 155-302 |
| Cow position: | chr17:37138772-37138920 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 158-302 |
| Cow position: | chr17:144163-144018 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 158-302 |
| Cow position: | chr17:10271508-10271653 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 158-302 |
| Cow position: | chr17:25181130-25180988 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 13 |
| Conread position: | 158-302 |
| Cow position: | chr17:38139521-38139671 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 162-302 |
| Cow position: | chr17:23318300-23318159 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 133 |
| Conread position: | 180-302 |
| Cow position: | chr17:34627809-34627688 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.