Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 1-267 |
| Cow position: | chr19:43733517-43733809 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 270 |
| Conread position: | 1-298 |
| Cow position: | chr19:42215866-42216176 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 59, 108 |
| Conread position: | 2-302 |
| Cow position: | chr19:9099941-9100258 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 59-302 |
| Cow position: | chr19:15936674-15936943 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 22, 215 |
| Conread position: | 59-302 |
| Cow position: | chr19:31381161-31380896 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 202 |
| Conread position: | 137-294 |
| Cow position: | chr19:39876592-39876428 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 137-302 |
| Cow position: | chr19:11636998-11636831 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 137-302 |
| Cow position: | chr19:21285146-21284970 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 155-263 |
| Cow position: | chr19:19924640-19924530 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 155-298 |
| Cow position: | chr19:33260984-33261128 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 155-302 |
| Cow position: | chr19:7839083-7838937 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 155-302 |
| Cow position: | chr19:36318267-36318416 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 155-302 |
| Cow position: | chr19:48478939-48479088 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 156-298 |
| Cow position: | chr19:22863706-22863562 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 33, 69 |
| Conread position: | 156-299 |
| Cow position: | chr19:7123825-7123969 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 157-302 |
| Cow position: | chr19:21091058-21091205 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 158-300 |
| Cow position: | chr19:53738298-53738442 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 158-301 |
| Cow position: | chr19:24689246-24689391 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 158-302 |
| Cow position: | chr19:952655-952799 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 27, 121 |
| Conread position: | 158-302 |
| Cow position: | chr19:31126758-31126908 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 159-300 |
| Cow position: | chr19:31614073-31614217 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 159-302 |
| Cow position: | chr19:25271452-25271308 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 7 |
| Conread position: | 159-302 |
| Cow position: | chr19:55236453-55236596 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 161-302 |
| Cow position: | chr19:19662011-19662155 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 166-298 |
| Cow position: | chr19:2342452-2342585 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 118 |
Show alignments to all cow chromosomes.