Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 2-302 |
| Cow position: | chr23:28721433-28721114 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 69, 191 |
| Conread position: | 63-302 |
| Cow position: | chr23:8930263-8930013 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 73-298 |
| Cow position: | chr23:22588404-22588160 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 162 |
| Conread position: | 73-300 |
| Cow position: | chr23:23470803-23471031 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 58 |
| Conread position: | 73-302 |
| Cow position: | chr23:16793460-16793706 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 81-276 |
| Cow position: | chr23:8538243-8538037 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 90-301 |
| Cow position: | chr23:9711688-9711472 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 116-267 |
| Cow position: | chr23:23974853-23974999 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 136-273 |
| Cow position: | chr23:22418937-22419078 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 139-302 |
| Cow position: | chr23:4955983-4956143 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 155-301 |
| Cow position: | chr23:35498052-35497905 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 125 |
| Conread position: | 155-302 |
| Cow position: | chr23:14126541-14126688 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 30, 76 |
| Conread position: | 155-302 |
| Cow position: | chr23:20585725-20585577 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 158-302 |
| Cow position: | chr23:7611242-7611385 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 90 |
| Conread position: | 158-302 |
| Cow position: | chr23:30210368-30210224 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 22 |
| Conread position: | 161-302 |
| Cow position: | chr23:11434280-11434136 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 162-302 |
| Cow position: | chr23:13319923-13320061 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 44 |
| Conread position: | 166-302 |
| Cow position: | chr23:18326791-18326928 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 184-302 |
| Cow position: | chr23:19791981-19792099 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.