Cow genome map


           Conread name:
           rpfco0113_l5.y1
        

               Conread position:
               64-302
               

               Cow position:
               chr28:31372998-31373233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               122, 40
               

               Conread position:
               90-302
               

               Cow position:
               chr28:21873669-21873886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               137-276
               

               Cow position:
               chr28:11200925-11200784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               137-296
               

               Cow position:
               chr28:25340227-25340392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 93
               

               Conread position:
               139-302
               

               Cow position:
               chr28:19133739-19133901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               23, 28
               

               Conread position:
               154-296
               

               Cow position:
               chr28:11355699-11355555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               155-275
               

               Cow position:
               chr28:13693728-13693849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 65
               

               Conread position:
               155-302
               

               Cow position:
               chr28:9821991-9821844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 140
               

               Conread position:
               159-297
               

               Cow position:
               chr28:4274861-4274722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               160-302
               

               Cow position:
               chr28:1202262-1202118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               162-274
               

               Cow position:
               chr28:4406231-4406343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               22, 83
               

               Conread position:
               169-263
               

               Cow position:
               chr28:6993622-6993526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 0
               
Show alignments to all cow chromosomes.