Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 1-129 |
| Cow position: | chr7:48893291-48893157 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 73-302 |
| Cow position: | chr7:10345526-10345304 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 84-296 |
| Cow position: | chr7:49714758-49714972 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 51 |
| Conread position: | 86-302 |
| Cow position: | chr7:39603267-39603485 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 97-299 |
| Cow position: | chr7:55714022-55714231 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 97-302 |
| Cow position: | chr7:53743945-53743737 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 125-275 |
| Cow position: | chr7:44442676-44442526 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 137-298 |
| Cow position: | chr7:20355949-20356107 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 145-268 |
| Cow position: | chr7:62006180-62006055 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 121 |
| Conread position: | 149-274 |
| Cow position: | chr7:12233023-12233154 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 154-275 |
| Cow position: | chr7:58354687-58354564 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 155-302 |
| Cow position: | chr7:8826830-8826977 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 29, 128 |
| Conread position: | 155-302 |
| Cow position: | chr7:37906347-37906198 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 155-302 |
| Cow position: | chr7:41727964-41728105 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 155-302 |
| Cow position: | chr7:53005363-53005512 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 155-302 |
| Cow position: | chr7:57260233-57260087 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 158-275 |
| Cow position: | chr7:24033393-24033274 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 158-275 |
| Cow position: | chr7:25685027-25684908 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 158-300 |
| Cow position: | chr7:47874968-47874825 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 158-302 |
| Cow position: | chr7:7507568-7507713 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 120 |
| Conread position: | 158-302 |
| Cow position: | chr7:20108974-20108830 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 158-302 |
| Cow position: | chr7:40192762-40192914 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 158-302 |
| Cow position: | chr7:62102611-62102757 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 159-287 |
| Cow position: | chr7:22153175-22153307 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 159-302 |
| Cow position: | chr7:51321754-51321895 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 160-302 |
| Cow position: | chr7:25914471-25914325 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 160-302 |
| Cow position: | chr7:26908015-26907874 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 160-302 |
| Cow position: | chr7:58490100-58490245 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 161-302 |
| Cow position: | chr7:12755133-12754992 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 162-296 |
| Cow position: | chr7:5249892-5249756 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
Show alignments to all cow chromosomes.