Cow genome map


           Conread name:
           rpfco0113_l5.y1
        

               Conread position:
               1-302
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 105
               

               Conread position:
               59-298
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 129
               

               Conread position:
               73-301
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 205
               

               Conread position:
               79-302
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               43, 211
               

               Conread position:
               80-296
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               84-301
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               125-302
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               136-275
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               137-299
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               145-287
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               35, 80
               

               Conread position:
               155-267
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               155-274
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               155-275
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 45
               

               Conread position:
               155-300
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               155-301
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 124
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               30, 140
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               155-302
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 133
               

               Conread position:
               158-284
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               158-287
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               158-300
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               158-302
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               158-302
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               28, 140
               

               Conread position:
               159-262
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               159-302
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               159-302
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 105
               

               Conread position:
               160-300
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               162-301
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               162-302
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               167-302
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               179-302
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               180-300
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-302
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.