Cow genome map
| Conread name: | rpfco0113_l5.y1 |
| Conread position: | 1-302 |
| Cow position: | chr9:5059106-5059407 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 70, 133 |
| Conread position: | 1-302 |
| Cow position: | chr9:20038898-20039221 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 73, 150 |
| Conread position: | 1-302 |
| Cow position: | chr9:34568491-34568801 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 59-296 |
| Cow position: | chr9:8914448-8914196 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 108 |
| Conread position: | 59-302 |
| Cow position: | chr9:20839800-20839536 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 73-266 |
| Cow position: | chr9:38385705-38385910 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 160 |
| Conread position: | 73-298 |
| Cow position: | chr9:11146490-11146724 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 54, 38 |
| Conread position: | 88-299 |
| Cow position: | chr9:46227008-46226800 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 97-300 |
| Cow position: | chr9:15034021-15033818 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 99-302 |
| Cow position: | chr9:25469166-25468963 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 145-302 |
| Cow position: | chr9:33059202-33059364 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 155-262 |
| Cow position: | chr9:58699059-58699168 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 155-300 |
| Cow position: | chr9:14184722-14184576 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 155-302 |
| Cow position: | chr9:15006693-15006841 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 155-302 |
| Cow position: | chr9:17110829-17110681 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 155-302 |
| Cow position: | chr9:19382386-19382238 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 155-302 |
| Cow position: | chr9:38927139-38926992 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 27, 12 |
| Conread position: | 157-275 |
| Cow position: | chr9:18206451-18206571 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 158-274 |
| Cow position: | chr9:64007828-64007946 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 158-287 |
| Cow position: | chr9:43926055-43926187 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 158-302 |
| Cow position: | chr9:5172384-5172240 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 158-302 |
| Cow position: | chr9:21462812-21462958 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 158-302 |
| Cow position: | chr9:32847943-32847797 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 158-302 |
| Cow position: | chr9:34204187-34204037 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 158-302 |
| Cow position: | chr9:34310081-34309936 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 158-302 |
| Cow position: | chr9:40007915-40007770 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 137 |
| Conread position: | 159-284 |
| Cow position: | chr9:56252951-56252826 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-298 |
| Cow position: | chr9:46242206-46242346 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 160-302 |
| Cow position: | chr9:24837591-24837445 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 42 |
| Conread position: | 160-302 |
| Cow position: | chr9:49651778-49651636 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 25, 96 |
| Conread position: | 163-275 |
| Cow position: | chr9:52633443-52633556 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 166-302 |
| Cow position: | chr9:18110820-18110955 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 80 |
| Conread position: | 168-302 |
| Cow position: | chr9:35708575-35708711 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 178-302 |
| Cow position: | chr9:30020011-30019889 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 180-302 |
| Cow position: | chr9:9761072-9760951 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
Show alignments to all cow chromosomes.