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Cow genome map

           
Conread name:
           
rpfco0121_d19.y1
        

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:24729358-24729108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 72
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr13:9900713-9900460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr13:15460388-15460642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr13:34941247-34941519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:15162263-15162554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:20440191-20440485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:22085349-22085640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 73
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:33351966-33352261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 25
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:34262973-34263265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:37945810-37946100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
148, 72
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:54237747-54237456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
163, 70
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr13:39950113-39950412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
212, 57
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr13:16015225-16014910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:35525803-35526118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr13:28683762-28683437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
193, 37
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr13:18215840-18215492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr13:34052187-34052540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr13:41918757-41919091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 18
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr13:54286360-54286695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr13:20377932-20378299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr13:60974475-60974119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr13:7663023-7663406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 26
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr13:27027368-27027747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 65
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr13:25248728-25249181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr13:37947605-37948054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 72
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr13:61170315-61170754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 55
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:15869528-15869085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr13:21155084-21155537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 11
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chr13:60690307-60690790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr13:17800483-17800009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr13:20571136-20570651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 254
               

               
Conread position:
               
1-496
               

               
Cow position:
               
chr13:42114420-42113940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 70
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr13:46324381-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr13:15446452-15445953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr13:34375665-34375176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr13:311842-311354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr13:17820853-17821354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 51
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr13:20665981-20666470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr13:24754300-24753803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr13:37483854-37484363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 283
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr13:43762581-43762084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 72
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr13:57493774-57494273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr13:6974581-6974075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr13:12990254-12989764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
146, 55
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr13:20605709-20606203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr13:36771012-36771507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr13:44278762-44278262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr13:45353440-45352945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 105
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr13:46182183-46181704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 72
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr13:51902027-51901496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 75
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr13:185919-185559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr13:37516731-37517166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 40
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr13:51941143-51940650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
2-503
               

               
Cow position:
               
chr13:2414433-2413944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 71
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr13:25531381-25531878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr13:42085221-42084965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr13:19882631-19883113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 70
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr13:40943651-40943163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr13:20563399-20562907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 67
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr13:20649580-20650073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 70
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr13:60429674-60430164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 67
               

               
Conread position:
               
5-324
               

               
Cow position:
               
chr13:52057944-52057610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 69
               

               
Conread position:
               
9-287
               

               
Cow position:
               
chr13:47007338-47007626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
11-464
               

               
Cow position:
               
chr13:19178673-19178224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 60
               

               
Conread position:
               
28-287
               

               
Cow position:
               
chr13:52284292-52284012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
33-467
               

               
Cow position:
               
chr13:5752050-5752480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
114, 19
               

               
Conread position:
               
35-469
               

               
Cow position:
               
chr13:16270312-16269882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
36-503
               

               
Cow position:
               
chr13:46516437-46515975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
37-439
               

               
Cow position:
               
chr13:562763-563166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 36
               

               
Conread position:
               
39-501
               

               
Cow position:
               
chr13:9974694-9975158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 32
               

               
Conread position:
               
39-503
               

               
Cow position:
               
chr13:10988703-10989156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
42-499
               

               
Cow position:
               
chr13:17158495-17158960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
48-284
               

               
Cow position:
               
chr13:37946612-37946849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 166
               

               
Conread position:
               
50-501
               

               
Cow position:
               
chr13:21276217-21275775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 23
               

               
Conread position:
               
50-503
               

               
Cow position:
               
chr13:44626739-44626282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
52-501
               

               
Cow position:
               
chr13:1042597-1043053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
52-501
               

               
Cow position:
               
chr13:23269854-23270289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
52-505
               

               
Cow position:
               
chr13:42229679-42229224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 109
               

               
Conread position:
               
56-503
               

               
Cow position:
               
chr13:17613701-17613254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
60-503
               

               
Cow position:
               
chr13:15958968-15958528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 14
               

               
Conread position:
               
68-394
               

               
Cow position:
               
chr13:15172064-15172388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 197
               

               
Conread position:
               
69-505
               

               
Cow position:
               
chr13:2774461-2774039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 175
               

               
Conread position:
               
73-501
               

               
Cow position:
               
chr13:6153440-6153868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 185
               

               
Conread position:
               
73-505
               

               
Cow position:
               
chr13:12448649-12449076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 182
               

               
Conread position:
               
75-287
               

               
Cow position:
               
chr13:889847-890068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
123, 90
               

               
Conread position:
               
75-474
               

               
Cow position:
               
chr13:33517571-33517981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 218
               

               
Conread position:
               
80-505
               

               
Cow position:
               
chr13:26479885-26480292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 186
               

               
Conread position:
               
81-283
               

               
Cow position:
               
chr13:37980320-37980528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 189
               

               
Conread position:
               
86-493
               

               
Cow position:
               
chr13:21039277-21039675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
87-264
               

               
Cow position:
               
chr13:21524750-21524559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
87-473
               

               
Cow position:
               
chr13:5091337-5091726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
93-497
               

               
Cow position:
               
chr13:27524943-27525341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 188
               

               
Conread position:
               
97-503
               

               
Cow position:
               
chr13:37382126-37381715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 160
               

               
Conread position:
               
99-287
               

               
Cow position:
               
chr13:19119310-19119102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
99-503
               

               
Cow position:
               
chr13:34035681-34035281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
53, 178
               

               
Conread position:
               
100-501
               

               
Cow position:
               
chr13:56148852-56148437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
100-501
               

               
Cow position:
               
chr13:56160115-56160530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
102-244
               

               
Cow position:
               
chr13:8779702-8779550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 9
               

               
Conread position:
               
102-498
               

               
Cow position:
               
chr13:13306412-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
106-329
               

               
Cow position:
               
chr13:13089329-13089080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 215
               

               
Conread position:
               
106-374
               

               
Cow position:
               
chr13:14927543-14927278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
46, 158
               

               
Conread position:
               
112-287
               

               
Cow position:
               
chr13:25817813-25817626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
112-501
               

               
Cow position:
               
chr13:9265512-9265911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
50, 182
               

               
Conread position:
               
115-502
               

               
Cow position:
               
chr13:25537938-25537538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 146
               

               
Conread position:
               
128-503
               

               
Cow position:
               
chr13:37521451-37521830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr13:7076531-7076172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
138-501
               

               
Cow position:
               
chr13:6079145-6079496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
141-295
               

               
Cow position:
               
chr13:21287822-21287992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
142-287
               

               
Cow position:
               
chr13:18244125-18243967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
146-419
               

               
Cow position:
               
chr13:20530878-20531150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
146-493
               

               
Cow position:
               
chr13:24715496-24715165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
147-300
               

               
Cow position:
               
chr13:14576928-14576761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
147-501
               

               
Cow position:
               
chr13:18166992-18166648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
147-503
               

               
Cow position:
               
chr13:38277875-38278234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 189
               

               
Conread position:
               
156-468
               

               
Cow position:
               
chr13:1780088-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
156-501
               

               
Cow position:
               
chr13:45022955-45023293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
156-503
               

               
Cow position:
               
chr13:26261541-26261874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
40, 108
               

               
Conread position:
               
157-322
               

               
Cow position:
               
chr13:9570233-9570063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
157-334
               

               
Cow position:
               
chr13:43629528-43629712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
157-501
               

               
Cow position:
               
chr13:52285067-52284731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
157-503
               

               
Cow position:
               
chr13:3315421-3315761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
160-501
               

               
Cow position:
               
chr13:15974859-15974534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
160-503
               

               
Cow position:
               
chr13:8201236-8201569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
161-299
               

               
Cow position:
               
chr13:25927040-25926884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
161-453
               

               
Cow position:
               
chr13:38012609-38012325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
161-500
               

               
Cow position:
               
chr13:40722462-40722790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
161-501
               

               
Cow position:
               
chr13:23960558-23960886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 56
               

               
Conread position:
               
161-501
               

               
Cow position:
               
chr13:42200866-42200535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
161-503
               

               
Cow position:
               
chr13:12614508-12614167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
161-503
               

               
Cow position:
               
chr13:23166849-23167187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
161-504
               

               
Cow position:
               
chr13:61166209-61166537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
35, 78
               

               
Conread position:
               
162-287
               

               
Cow position:
               
chr13:34299397-34299531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
163-503
               

               
Cow position:
               
chr13:52879656-52879316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
164-501
               

               
Cow position:
               
chr13:12283080-12282741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
164-503
               

               
Cow position:
               
chr13:8524376-8524704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
164-503
               

               
Cow position:
               
chr13:15622052-15621725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
165-481
               

               
Cow position:
               
chr13:16024832-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
165-486
               

               
Cow position:
               
chr13:9587340-9587658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 98
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr13:20705960-20706289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
166-501
               

               
Cow position:
               
chr13:55673962-55674292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
166-503
               

               
Cow position:
               
chr13:12926033-12925693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 146
               

               
Conread position:
               
168-503
               

               
Cow position:
               
chr13:10924665-10925007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
175-459
               

               
Cow position:
               
chr13:30026347-30026066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 81
               

               
Conread position:
               
177-445
               

               
Cow position:
               
chr13:54093972-54093716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
21, 78
               

               
Conread position:
               
186-444
               

               
Cow position:
               
chr13:20041748-20041998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
188-501
               

               
Cow position:
               
chr13:20839784-20839482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
204-500
               

               
Cow position:
               
chr13:15195014-15195288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
217, 62
               

               
Conread position:
               
204-503
               

               
Cow position:
               
chr13:37592743-37593033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
206-501
               

               
Cow position:
               
chr13:15991029-15991314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
206-503
               

               
Cow position:
               
chr13:14771654-14771366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
209-501
               

               
Cow position:
               
chr13:20679535-20679255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
209-503
               

               
Cow position:
               
chr13:9643692-9643973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
212, 34
               

               
Conread position:
               
209-503
               

               
Cow position:
               
chr13:61990144-61990411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
212, 36
               

               
Conread position:
               
273-443
               

               
Cow position:
               
chr13:322638-322812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
282-467
               

               
Cow position:
               
chr13:5658597-5658777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
282-479
               

               
Cow position:
               
chr13:2192845-2192649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
284-464
               

               
Cow position:
               
chr13:57475283-57475466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 98
               

               
Conread position:
               
288-501
               

               
Cow position:
               
chr13:152083-151879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr13:49507722-49507936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
291-438
               

               
Cow position:
               
chr13:13809434-13809585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
291-501
               

               
Cow position:
               
chr13:4664738-4664941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
297-501
               

               
Cow position:
               
chr13:12207160-12206964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr13:9900266-9900072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr13:19188418-19188215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr13:39232715-39232911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr13:13765903-13765706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
313-499
               

               
Cow position:
               
chr13:56678118-56677933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
322-492
               

               
Cow position:
               
chr13:43595018-43595183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 18
               

               
Conread position:
               
322-495
               

               
Cow position:
               
chr13:3989298-3989119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
69, 151
               

               
Conread position:
               
322-497
               

               
Cow position:
               
chr13:46329509-46329686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr13:9593603-9593421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
77, 150
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr13:18058151-18058334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 151
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr13:54388924-54389105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr13:6060915-6061094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
323-501
               

               
Cow position:
               
chr13:11955015-11955201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
323-503
               

               
Cow position:
               
chr13:25381054-25380877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
324-439
               

               
Cow position:
               
chr13:55947865-55947750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-449
               

               
Cow position:
               
chr13:16163971-16163842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
324-468
               

               
Cow position:
               
chr13:14870620-14870480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
324-481
               

               
Cow position:
               
chr13:4420437-4420278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
324-489
               

               
Cow position:
               
chr13:41253715-41253549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
324-491
               

               
Cow position:
               
chr13:16203762-16203595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
324-497
               

               
Cow position:
               
chr13:11591838-11591674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
324-497
               

               
Cow position:
               
chr13:13954298-13954473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 147
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr13:607175-607339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr13:1363784-1363613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr13:20357801-20357974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr13:50750961-50751137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 147
               

               
Conread position:
               
324-499
               

               
Cow position:
               
chr13:29831344-29831513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 74
               

               
Conread position:
               
324-500
               

               
Cow position:
               
chr13:11061078-11060905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 60
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr13:9800598-9800429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr13:11321523-11321701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr13:13176744-13176566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr13:17977433-17977269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr13:24230302-24230130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr13:45725988-45725808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-502
               

               
Cow position:
               
chr13:19240528-19240344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:5758248-5758428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:6849020-6848840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
92, 146
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:8652346-8652528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 148
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:15192797-15192972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:18929620-18929443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 62
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:18995220-18995040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
30, 146
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:21269489-21269668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:23512459-23512284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:25435027-25435209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 148
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:26369618-26369438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 153
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:52228010-52228186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:53553170-53553348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:55727993-55727816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:56034766-56034945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
96, 133
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr13:59170744-59170567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
324-505
               

               
Cow position:
               
chr13:5060837-5060659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
324-505
               

               
Cow position:
               
chr13:53330364-53330190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
325-501
               

               
Cow position:
               
chr13:49796109-49795946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 70
               

               
Conread position:
               
325-503
               

               
Cow position:
               
chr13:13338949-13338770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
91, 145
               

               
Conread position:
               
325-503
               

               
Cow position:
               
chr13:16187806-16187982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
95, 8
               

               
Conread position:
               
326-444
               

               
Cow position:
               
chr13:24066016-24066135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
326-455
               

               
Cow position:
               
chr13:16711717-16711588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
95, 73
               

               
Conread position:
               
326-483
               

               
Cow position:
               
chr13:2463142-2463301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 145
               

               
Conread position:
               
326-501
               

               
Cow position:
               
chr13:15110410-15110230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
326-501
               

               
Cow position:
               
chr13:52749388-52749554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 27
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr13:3211642-3211463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr13:18989805-18989636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
94, 63
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr13:20137915-20137735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr13:20174839-20174655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr13:49520731-49520908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 64
               

               
Conread position:
               
326-505
               

               
Cow position:
               
chr13:15281847-15282023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
13, 75
               

               
Conread position:
               
327-489
               

               
Cow position:
               
chr13:15964408-15964244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
79, 147
               

               
Conread position:
               
327-501
               

               
Cow position:
               
chr13:1569013-1568848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
327-501
               

               
Cow position:
               
chr13:43184782-43184965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
72, 151
               

               
Conread position:
               
328-501
               

               
Cow position:
               
chr13:34941563-34941734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
329-500
               

               
Cow position:
               
chr13:6835709-6835878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
329-503
               

               
Cow position:
               
chr13:17822866-17823036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 8
               

               
Conread position:
               
331-501
               

               
Cow position:
               
chr13:10845681-10845520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 62
               

               
Conread position:
               
332-496
               

               
Cow position:
               
chr13:26120278-26120439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 41
               

               
Conread position:
               
335-503
               

               
Cow position:
               
chr13:17563816-17563653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
336-467
               

               
Cow position:
               
chr13:8367924-8367793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
85, 59
               

               
Conread position:
               
339-501
               

               
Cow position:
               
chr13:38872874-38873028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
339-503
               

               
Cow position:
               
chr13:46112044-46111883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
82, 131
               

               
Conread position:
               
343-501
               

               
Cow position:
               
chr13:827316-827161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
349-503
               

               
Cow position:
               
chr13:6861250-6861095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
353-503
               

               
Cow position:
               
chr13:62008176-62008021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
355-503
               

               
Cow position:
               
chr13:17838011-17837864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
355-503
               

               
Cow position:
               
chr13:24110548-24110394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
364-505
               

               
Cow position:
               
chr13:1147098-1147238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
369-501
               

               
Cow position:
               
chr13:7149465-7149595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
52, 29
               

               
Conread position:
               
369-503
               

               
Cow position:
               
chr13:43919214-43919347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
370-501
               

               
Cow position:
               
chr13:60393830-60393700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
374-503
               

               
Cow position:
               
chr13:6342045-6342174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
374-503
               

               
Cow position:
               
chr13:51856843-51856971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
383-503
               

               
Cow position:
               
chr13:41157438-41157319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 16
               
Show alignments to all cow chromosomes.