Cow genome map
| Conread name: | rpfco0121_d19.y1 |
| Conread position: | 1-241 |
| Cow position: | chr24:24002529-24002778 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 71 |
| Conread position: | 1-253 |
| Cow position: | chr24:6450083-6450330 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 72 |
| Conread position: | 1-255 |
| Cow position: | chr24:37037165-37037432 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 133, 72 |
| Conread position: | 1-281 |
| Cow position: | chr24:28303799-28303501 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 70 |
| Conread position: | 1-285 |
| Cow position: | chr24:20970241-20969944 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 151, 72 |
| Conread position: | 1-287 |
| Cow position: | chr24:814711-814408 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 72 |
| Conread position: | 1-287 |
| Cow position: | chr24:34564676-34564980 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 1-405 |
| Cow position: | chr24:27809730-27810136 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 1-466 |
| Cow position: | chr24:28554003-28553543 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 261 |
| Conread position: | 1-468 |
| Cow position: | chr24:27052940-27052481 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 72 |
| Conread position: | 1-471 |
| Cow position: | chr24:30484383-30483932 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 64 |
| Conread position: | 1-480 |
| Cow position: | chr24:27874157-27874619 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 63 |
| Conread position: | 1-489 |
| Cow position: | chr24:18485448-18484961 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 42 |
| Conread position: | 1-494 |
| Cow position: | chr24:20024163-20024651 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 66 |
| Conread position: | 1-498 |
| Cow position: | chr24:28721432-28721929 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 29 |
| Conread position: | 1-499 |
| Cow position: | chr24:30545334-30544823 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 1-501 |
| Cow position: | chr24:5141483-5141987 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 285 |
| Conread position: | 1-501 |
| Cow position: | chr24:11118838-11119322 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 137 |
| Conread position: | 1-501 |
| Cow position: | chr24:18970953-18970463 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 65 |
| Conread position: | 1-501 |
| Cow position: | chr24:27290427-27290916 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 72 |
| Conread position: | 1-501 |
| Cow position: | chr24:29679756-29679268 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 1-501 |
| Cow position: | chr24:31323839-31324330 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 72 |
| Conread position: | 1-501 |
| Cow position: | chr24:32205252-32204750 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 79 |
| Conread position: | 1-501 |
| Cow position: | chr24:33098942-33098428 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 76 |
| Conread position: | 1-503 |
| Cow position: | chr24:29596255-29595762 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 70 |
| Conread position: | 1-505 |
| Cow position: | chr24:11839731-11840236 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 1-505 |
| Cow position: | chr24:29673071-29673571 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 1-505 |
| Cow position: | chr24:33943951-33944450 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 70 |
| Conread position: | 2-287 |
| Cow position: | chr24:18025412-18025111 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 191, 25 |
| Conread position: | 2-333 |
| Cow position: | chr24:15247073-15246727 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 117 |
| Conread position: | 2-500 |
| Cow position: | chr24:28062499-28062992 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 54 |
| Conread position: | 2-501 |
| Cow position: | chr24:29170528-29171006 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 71 |
| Conread position: | 3-285 |
| Cow position: | chr24:6154385-6154667 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 219 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 191, 101 |
| Conread position: | 3-289 |
| Cow position: | chr24:40056166-40055863 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 3-387 |
| Cow position: | chr24:11006766-11007151 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 3-456 |
| Cow position: | chr24:39219289-39218839 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 60 |
| Conread position: | 3-501 |
| Cow position: | chr24:33372112-33372597 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 3-501 |
| Cow position: | chr24:43432332-43432835 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 350 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 32, 127 |
| Conread position: | 3-503 |
| Cow position: | chr24:44987820-44987328 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 69 |
| Conread position: | 5-268 |
| Cow position: | chr24:5652410-5652139 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 189, 66 |
| Conread position: | 6-291 |
| Cow position: | chr24:27754252-27754546 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 67 |
| Conread position: | 6-503 |
| Cow position: | chr24:19466377-19465870 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 65 |
| Conread position: | 7-288 |
| Cow position: | chr24:39492856-39493152 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 7-453 |
| Cow position: | chr24:16625941-16625488 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 66 |
| Conread position: | 10-471 |
| Cow position: | chr24:7917808-7917345 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 34 |
| Conread position: | 11-501 |
| Cow position: | chr24:40129674-40130174 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 33 |
| Conread position: | 24-464 |
| Cow position: | chr24:37246644-37246213 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 308 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 123, 49 |
| Conread position: | 27-501 |
| Cow position: | chr24:3493473-3493929 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 43 |
| Conread position: | 38-441 |
| Cow position: | chr24:11876472-11876874 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 294 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 35 |
| Conread position: | 38-501 |
| Cow position: | chr24:43363950-43364403 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 36 |
| Conread position: | 39-501 |
| Cow position: | chr24:29606472-29605988 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 34 |
| Conread position: | 40-285 |
| Cow position: | chr24:12851328-12851577 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 112, 33 |
| Conread position: | 46-501 |
| Cow position: | chr24:17955840-17955400 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 26 |
| Conread position: | 50-444 |
| Cow position: | chr24:6340618-6340995 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 53-501 |
| Cow position: | chr24:41985569-41986040 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 56-497 |
| Cow position: | chr24:44041400-44040963 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 17 |
| Conread position: | 67-505 |
| Cow position: | chr24:13625905-13626332 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 308 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 85, 152 |
| Conread position: | 75-287 |
| Cow position: | chr24:20923226-20923444 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 82 |
| Conread position: | 75-501 |
| Cow position: | chr24:39483100-39483521 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 79, 105 |
| Conread position: | 77-503 |
| Cow position: | chr24:25320619-25321032 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 6 |
| Conread position: | 80-286 |
| Cow position: | chr24:38479335-38479115 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 184 |
| Conread position: | 81-501 |
| Cow position: | chr24:20874310-20874726 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 295 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 117, 52 |
| Conread position: | 82-281 |
| Cow position: | chr24:42862288-42862496 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 82-463 |
| Cow position: | chr24:18405673-18405302 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 184 |
| Conread position: | 86-501 |
| Cow position: | chr24:31159235-31159660 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 66, 131 |
| Conread position: | 100-490 |
| Cow position: | chr24:34532772-34533145 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 44, 156 |
| Conread position: | 106-501 |
| Cow position: | chr24:34272457-34272855 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 46, 157 |
| Conread position: | 108-380 |
| Cow position: | chr24:21252793-21252524 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 49, 150 |
| Conread position: | 116-496 |
| Cow position: | chr24:38347344-38347714 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 152 |
| Conread position: | 117-502 |
| Cow position: | chr24:29781829-29782208 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 280 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 123-498 |
| Cow position: | chr24:18734688-18734328 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 270 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 143 |
| Conread position: | 124-454 |
| Cow position: | chr24:34315032-34315355 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 31, 148 |
| Conread position: | 131-503 |
| Cow position: | chr24:27341344-27340972 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 19, 131 |
| Conread position: | 138-505 |
| Cow position: | chr24:15861910-15861545 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 144-462 |
| Cow position: | chr24:35795045-35794728 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 147-503 |
| Cow position: | chr24:42345309-42344950 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 27 |
| Conread position: | 151-264 |
| Cow position: | chr24:19804390-19804518 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 153-493 |
| Cow position: | chr24:39905753-39905419 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 260 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 61, 151 |
| Conread position: | 157-498 |
| Cow position: | chr24:8886625-8886952 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 157-503 |
| Cow position: | chr24:6102542-6102874 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 249, 53 |
| Conread position: | 162-465 |
| Cow position: | chr24:35073806-35074103 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 102 |
| Conread position: | 164-491 |
| Cow position: | chr24:20942893-20943199 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 165-503 |
| Cow position: | chr24:30229183-30229520 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 101 |
| Conread position: | 166-496 |
| Cow position: | chr24:7913716-7914046 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 166-498 |
| Cow position: | chr24:3430453-3430775 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 168-462 |
| Cow position: | chr24:250849-250571 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 30, 89 |
| Conread position: | 172-501 |
| Cow position: | chr24:19769222-19769534 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 174-455 |
| Cow position: | chr24:18390562-18390292 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 174-501 |
| Cow position: | chr24:19495-19149 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 24, 107 |
| Conread position: | 176-501 |
| Cow position: | chr24:41980934-41980616 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 186-501 |
| Cow position: | chr24:33724103-33723801 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 226, 59 |
| Conread position: | 209-444 |
| Cow position: | chr24:18695392-18695608 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 209-503 |
| Cow position: | chr24:20250133-20249849 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 45 |
| Conread position: | 215-457 |
| Cow position: | chr24:27781731-27781973 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 47 |
| Conread position: | 270-501 |
| Cow position: | chr24:35576719-35576494 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 284-444 |
| Cow position: | chr24:31382726-31382890 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 119, 14 |
| Conread position: | 284-481 |
| Cow position: | chr24:10841385-10841182 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 284-503 |
| Cow position: | chr24:40837605-40837819 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 29, 19 |
| Conread position: | 297-443 |
| Cow position: | chr24:30226784-30226928 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 305-503 |
| Cow position: | chr24:27418249-27418057 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 97, 44 |
| Conread position: | 314-499 |
| Cow position: | chr24:28990423-28990604 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 316-503 |
| Cow position: | chr24:17752252-17752065 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 82, 14 |
| Conread position: | 321-503 |
| Cow position: | chr24:34008711-34008526 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 67, 151 |
| Conread position: | 322-501 |
| Cow position: | chr24:2096024-2095837 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 155 |
| Conread position: | 322-501 |
| Cow position: | chr24:17104706-17104525 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 91, 149 |
| Conread position: | 322-501 |
| Cow position: | chr24:30897672-30897491 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 149 |
| Conread position: | 322-505 |
| Cow position: | chr24:27726149-27725963 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 323-493 |
| Cow position: | chr24:20801478-20801309 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 323-501 |
| Cow position: | chr24:28045618-28045804 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 25 |
| Conread position: | 323-503 |
| Cow position: | chr24:3152713-3152531 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 81, 59 |
| Conread position: | 324-451 |
| Cow position: | chr24:36554967-36554837 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 23, 30 |
| Conread position: | 324-453 |
| Cow position: | chr24:27552764-27552892 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 324-453 |
| Cow position: | chr24:42007608-42007738 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 80 |
| Conread position: | 324-484 |
| Cow position: | chr24:28253574-28253735 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 42 |
| Conread position: | 324-487 |
| Cow position: | chr24:19800715-19800878 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 35 |
| Conread position: | 324-490 |
| Cow position: | chr24:10012633-10012786 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 97, 24 |
| Conread position: | 324-498 |
| Cow position: | chr24:389969-390145 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 324-499 |
| Cow position: | chr24:16509839-16510020 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 97, 75 |
| Conread position: | 324-499 |
| Cow position: | chr24:32070834-32071004 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 65 |
| Conread position: | 324-500 |
| Cow position: | chr24:5683145-5683323 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 159 |
| Conread position: | 324-500 |
| Cow position: | chr24:24457377-24457206 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 324-501 |
| Cow position: | chr24:16645455-16645275 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 79, 148 |
| Conread position: | 324-501 |
| Cow position: | chr24:22647469-22647297 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 101, 49 |
| Conread position: | 324-501 |
| Cow position: | chr24:29586863-29587045 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 42 |
| Conread position: | 324-501 |
| Cow position: | chr24:32054528-32054706 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 324-501 |
| Cow position: | chr24:32370050-32369870 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 115, 146 |
| Conread position: | 324-503 |
| Cow position: | chr24:352737-352560 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 64 |
| Conread position: | 324-503 |
| Cow position: | chr24:2675190-2675362 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 324-503 |
| Cow position: | chr24:15707572-15707398 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 324-503 |
| Cow position: | chr24:41423477-41423650 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 129, 69 |
| Conread position: | 324-504 |
| Cow position: | chr24:35631855-35632028 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 99, 68 |
| Conread position: | 324-505 |
| Cow position: | chr24:18017096-18017276 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 91 |
| Conread position: | 324-505 |
| Cow position: | chr24:33465739-33465572 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 325-452 |
| Cow position: | chr24:25524917-25525040 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 325-501 |
| Cow position: | chr24:17434487-17434655 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 48 |
| Conread position: | 325-503 |
| Cow position: | chr24:26554729-26554550 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 325-503 |
| Cow position: | chr24:36008355-36008533 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 325-503 |
| Cow position: | chr24:37395340-37395164 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 74 |
| Conread position: | 326-466 |
| Cow position: | chr24:38006836-38006697 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 326-498 |
| Cow position: | chr24:23863764-23863587 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 148 |
| Conread position: | 326-501 |
| Cow position: | chr24:15373279-15373450 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 326-501 |
| Cow position: | chr24:28289379-28289208 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 326-505 |
| Cow position: | chr24:16895566-16895388 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 95, 55 |
| Conread position: | 326-505 |
| Cow position: | chr24:17832943-17832772 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 90, 67 |
| Conread position: | 327-501 |
| Cow position: | chr24:16089107-16089273 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 327-501 |
| Cow position: | chr24:24662258-24662086 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 329-503 |
| Cow position: | chr24:24755318-24755494 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 330-499 |
| Cow position: | chr24:35150396-35150561 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 91, 69 |
| Conread position: | 330-501 |
| Cow position: | chr24:39523573-39523404 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 91, 68 |
| Conread position: | 331-500 |
| Cow position: | chr24:6957382-6957540 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 334-501 |
| Cow position: | chr24:41405774-41405939 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 65 |
| Conread position: | 337-501 |
| Cow position: | chr24:43832404-43832573 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 143 |
| Conread position: | 340-501 |
| Cow position: | chr24:18614883-18615046 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 14 |
| Conread position: | 342-501 |
| Cow position: | chr24:16895244-16895093 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 345-499 |
| Cow position: | chr24:27900617-27900774 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 352-501 |
| Cow position: | chr24:21894944-21895094 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 354-503 |
| Cow position: | chr24:34496016-34496168 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 361-503 |
| Cow position: | chr24:7046843-7046703 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 60, 38 |
| Conread position: | 367-503 |
| Cow position: | chr24:40389518-40389656 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 110 |
Show alignments to all cow chromosomes.