Cow genome map
| Conread name: | rpfco0121_d19.y1 |
| Conread position: | 1-207 |
| Cow position: | chr29:27694132-27693925 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 157, 37 |
| Conread position: | 1-241 |
| Cow position: | chr29:457472-457221 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 1-264 |
| Cow position: | chr29:26778465-26778738 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 72 |
| Conread position: | 1-279 |
| Cow position: | chr29:11684575-11684881 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 1-284 |
| Cow position: | chr29:6635678-6635974 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 1-287 |
| Cow position: | chr29:18212419-18212112 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 236 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 50, 167 |
| Conread position: | 1-287 |
| Cow position: | chr29:21665549-21665850 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 72 |
| Conread position: | 1-287 |
| Cow position: | chr29:28775880-28775583 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 76 |
| Conread position: | 1-328 |
| Cow position: | chr29:40096539-40096881 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 1-336 |
| Cow position: | chr29:26263425-26263782 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 1-354 |
| Cow position: | chr29:11696108-11696478 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 252 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 40, 78 |
| Conread position: | 1-386 |
| Cow position: | chr29:21592277-21592690 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 1-471 |
| Cow position: | chr29:12005191-12004724 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 269 |
| Conread position: | 1-489 |
| Cow position: | chr29:24952255-24952743 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 1-497 |
| Cow position: | chr29:17606990-17607481 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 1-498 |
| Cow position: | chr29:2744697-2744203 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 7 |
| Conread position: | 1-498 |
| Cow position: | chr29:16609314-16609812 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 45 |
| Conread position: | 1-499 |
| Cow position: | chr29:4480600-4480108 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 72 |
| Conread position: | 1-501 |
| Cow position: | chr29:1325012-1325506 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 255 |
| Conread position: | 1-501 |
| Cow position: | chr29:13028010-13028507 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 26 |
| Conread position: | 1-501 |
| Cow position: | chr29:15941070-15940563 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 1-501 |
| Cow position: | chr29:19428241-19428730 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 79 |
| Conread position: | 1-501 |
| Cow position: | chr29:24623817-24624315 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 55 |
| Conread position: | 1-501 |
| Cow position: | chr29:36216693-36217179 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 70 |
| Conread position: | 1-501 |
| Cow position: | chr29:39567262-39567749 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 45 |
| Conread position: | 1-503 |
| Cow position: | chr29:4120427-4120923 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 70 |
| Conread position: | 1-503 |
| Cow position: | chr29:17408906-17409404 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 1-503 |
| Cow position: | chr29:32800131-32799643 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 47 |
| Conread position: | 1-504 |
| Cow position: | chr29:29056751-29057245 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 79 |
| Conread position: | 1-505 |
| Cow position: | chr29:1021846-1022367 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 72 |
| Conread position: | 1-505 |
| Cow position: | chr29:32290176-32290680 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 72 |
| Conread position: | 2-495 |
| Cow position: | chr29:40117129-40117633 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 292 |
| Conread position: | 3-272 |
| Cow position: | chr29:32308746-32308463 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 3-503 |
| Cow position: | chr29:26017934-26017433 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 72 |
| Conread position: | 4-501 |
| Cow position: | chr29:6925595-6926072 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 69 |
| Conread position: | 5-495 |
| Cow position: | chr29:17514-17050 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 33 |
| Conread position: | 5-502 |
| Cow position: | chr29:44009240-44008717 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 355 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 45 |
| Conread position: | 5-503 |
| Cow position: | chr29:13639775-13639297 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 68 |
| Conread position: | 6-503 |
| Cow position: | chr29:87434-86942 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 65 |
| Conread position: | 9-497 |
| Cow position: | chr29:20626169-20626630 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 342 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 143, 76 |
| Conread position: | 10-353 |
| Cow position: | chr29:35459175-35458826 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 204, 41 |
| Conread position: | 15-503 |
| Cow position: | chr29:11704729-11705181 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 58 |
| Conread position: | 26-287 |
| Cow position: | chr29:40894541-40894814 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 134, 25 |
| Conread position: | 29-494 |
| Cow position: | chr29:11398324-11397865 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 334 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 123, 29 |
| Conread position: | 29-498 |
| Cow position: | chr29:20674206-20673746 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 44 |
| Conread position: | 35-264 |
| Cow position: | chr29:25423433-25423674 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 37-482 |
| Cow position: | chr29:31926681-31926241 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 231 |
| Conread position: | 37-501 |
| Cow position: | chr29:9911772-9912243 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 36 |
| Conread position: | 38-495 |
| Cow position: | chr29:12450996-12451437 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 302 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 156, 35 |
| Conread position: | 38-503 |
| Cow position: | chr29:28868242-28868712 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 33 |
| Conread position: | 42-501 |
| Cow position: | chr29:26616121-26615653 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 24 |
| Conread position: | 45-496 |
| Cow position: | chr29:26771044-26771501 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 46-345 |
| Cow position: | chr29:42771285-42771588 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 148, 20 |
| Conread position: | 53-501 |
| Cow position: | chr29:6014718-6015193 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 18 |
| Conread position: | 53-501 |
| Cow position: | chr29:28195893-28195454 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 55-500 |
| Cow position: | chr29:2071941-2071505 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 281 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 97, 164 |
| Conread position: | 59-503 |
| Cow position: | chr29:38581601-38582037 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 14 |
| Conread position: | 68-471 |
| Cow position: | chr29:37785546-37785134 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 294 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 86, 206 |
| Conread position: | 75-503 |
| Cow position: | chr29:6293817-6293409 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 141 |
| Conread position: | 81-241 |
| Cow position: | chr29:26415754-26415927 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 84-460 |
| Cow position: | chr29:9686353-9685980 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 188 |
| Conread position: | 87-432 |
| Cow position: | chr29:37292432-37292778 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 88-498 |
| Cow position: | chr29:40892054-40891637 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 185 |
| Conread position: | 90-501 |
| Cow position: | chr29:9709361-9709762 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 62, 174 |
| Conread position: | 101-287 |
| Cow position: | chr29:26559844-26559645 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 105-496 |
| Cow position: | chr29:16657368-16657761 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 130 |
| Conread position: | 111-294 |
| Cow position: | chr29:4328117-4328310 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 41, 159 |
| Conread position: | 125-263 |
| Cow position: | chr29:22720828-22720977 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 130-287 |
| Cow position: | chr29:43252985-43252807 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 132-498 |
| Cow position: | chr29:45589881-45589524 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 137-503 |
| Cow position: | chr29:14501306-14501662 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 73, 131 |
| Conread position: | 147-481 |
| Cow position: | chr29:699887-699568 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 147-500 |
| Cow position: | chr29:750176-749839 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 49, 68 |
| Conread position: | 147-503 |
| Cow position: | chr29:6844907-6844563 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 106 |
| Conread position: | 150-501 |
| Cow position: | chr29:2263302-2262928 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 269 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 7, 212 |
| Conread position: | 156-499 |
| Cow position: | chr29:2984618-2984955 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 118 |
| Conread position: | 156-501 |
| Cow position: | chr29:9139139-9139488 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 99 |
| Conread position: | 156-501 |
| Cow position: | chr29:19338710-19339068 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 157-503 |
| Cow position: | chr29:12679886-12680225 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 122 |
| Conread position: | 157-503 |
| Cow position: | chr29:12784224-12783893 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 95 |
| Conread position: | 158-503 |
| Cow position: | chr29:22069014-22068671 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 97, 36 |
| Conread position: | 161-501 |
| Cow position: | chr29:29769610-29769284 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 165-456 |
| Cow position: | chr29:94805-94534 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 169-503 |
| Cow position: | chr29:17222152-17222482 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 29, 86 |
| Conread position: | 178-503 |
| Cow position: | chr29:44378665-44378350 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 188-500 |
| Cow position: | chr29:36183042-36183347 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 192-501 |
| Cow position: | chr29:38580752-38581046 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 194-503 |
| Cow position: | chr29:25474680-25474992 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 204-500 |
| Cow position: | chr29:22778393-22778110 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 217, 45 |
| Conread position: | 209-462 |
| Cow position: | chr29:11915610-11915856 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 197, 47 |
| Conread position: | 209-497 |
| Cow position: | chr29:4520129-4520399 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 34, 58 |
| Conread position: | 215-501 |
| Cow position: | chr29:40995119-40994824 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 195 |
| Conread position: | 276-458 |
| Cow position: | chr29:3539068-3538881 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 282-503 |
| Cow position: | chr29:41530696-41530919 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 288-503 |
| Cow position: | chr29:30440785-30441006 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 187 |
| Conread position: | 297-503 |
| Cow position: | chr29:41364977-41365178 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 305-503 |
| Cow position: | chr29:22936142-22936339 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 116, 144 |
| Conread position: | 318-501 |
| Cow position: | chr29:8862592-8862414 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 103, 8 |
| Conread position: | 322-451 |
| Cow position: | chr29:18580126-18579992 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 322-498 |
| Cow position: | chr29:4085210-4085373 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 27 |
| Conread position: | 322-501 |
| Cow position: | chr29:24252127-24252302 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 322-501 |
| Cow position: | chr29:27329781-27329960 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 322-503 |
| Cow position: | chr29:17154656-17154847 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 77, 155 |
| Conread position: | 322-505 |
| Cow position: | chr29:43251279-43251096 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 72, 57 |
| Conread position: | 323-501 |
| Cow position: | chr29:29176725-29176550 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 67 |
| Conread position: | 323-503 |
| Cow position: | chr29:5046542-5046722 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 97, 82 |
| Conread position: | 324-448 |
| Cow position: | chr29:30188448-30188322 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 324-455 |
| Cow position: | chr29:4334619-4334748 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 324-457 |
| Cow position: | chr29:32963447-32963573 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 324-458 |
| Cow position: | chr29:11489831-11489696 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 121 |
| Conread position: | 324-468 |
| Cow position: | chr29:1395487-1395632 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 43 |
| Conread position: | 324-483 |
| Cow position: | chr29:22175578-22175730 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 324-488 |
| Cow position: | chr29:4052093-4051933 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 324-493 |
| Cow position: | chr29:18212100-18211939 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 32 |
| Conread position: | 324-497 |
| Cow position: | chr29:21941490-21941664 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 324-497 |
| Cow position: | chr29:29795494-29795319 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 147 |
| Conread position: | 324-498 |
| Cow position: | chr29:11719855-11720031 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 324-501 |
| Cow position: | chr29:6337552-6337731 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 324-501 |
| Cow position: | chr29:12025579-12025408 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 73, 134 |
| Conread position: | 324-501 |
| Cow position: | chr29:16309633-16309810 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 58 |
| Conread position: | 324-501 |
| Cow position: | chr29:24292762-24292935 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 324-501 |
| Cow position: | chr29:26416249-26416418 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 324-503 |
| Cow position: | chr29:2055949-2056130 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 80, 145 |
| Conread position: | 324-503 |
| Cow position: | chr29:5409249-5409072 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 324-503 |
| Cow position: | chr29:6286267-6286092 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 324-503 |
| Cow position: | chr29:8176542-8176724 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 59, 154 |
| Conread position: | 324-503 |
| Cow position: | chr29:11053968-11053791 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 324-503 |
| Cow position: | chr29:20910803-20910623 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 118 |
| Conread position: | 324-503 |
| Cow position: | chr29:23697870-23698047 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 324-503 |
| Cow position: | chr29:25333571-25333392 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 80, 33 |
| Conread position: | 324-503 |
| Cow position: | chr29:29942839-29942658 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 147 |
| Conread position: | 326-471 |
| Cow position: | chr29:14484651-14484499 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 326-484 |
| Cow position: | chr29:25839587-25839750 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 326-499 |
| Cow position: | chr29:27668770-27668595 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 143 |
| Conread position: | 326-501 |
| Cow position: | chr29:12626086-12625909 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 73, 145 |
| Conread position: | 326-502 |
| Cow position: | chr29:17297027-17297204 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 90, 144 |
| Conread position: | 326-503 |
| Cow position: | chr29:17168298-17168477 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 68, 141 |
| Conread position: | 326-503 |
| Cow position: | chr29:23389663-23389488 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 74, 143 |
| Conread position: | 326-503 |
| Cow position: | chr29:28674814-28674636 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 326-503 |
| Cow position: | chr29:34297678-34297499 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 145 |
| Conread position: | 327-501 |
| Cow position: | chr29:30227379-30227214 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 327-503 |
| Cow position: | chr29:3685618-3685449 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 94, 45 |
| Conread position: | 328-501 |
| Cow position: | chr29:21195897-21195725 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 95, 58 |
| Conread position: | 330-501 |
| Cow position: | chr29:24578755-24578930 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 41, 143 |
| Conread position: | 330-501 |
| Cow position: | chr29:40583690-40583853 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 75 |
| Conread position: | 331-498 |
| Cow position: | chr29:13373197-13373365 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 90, 63 |
| Conread position: | 331-501 |
| Cow position: | chr29:10235235-10235067 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 73, 133 |
| Conread position: | 331-503 |
| Cow position: | chr29:31891631-31891462 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 89, 59 |
| Conread position: | 332-501 |
| Cow position: | chr29:27873503-27873668 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 41 |
| Conread position: | 340-491 |
| Cow position: | chr29:13867304-13867153 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 345-498 |
| Cow position: | chr29:13486861-13487015 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 125 |
| Conread position: | 345-503 |
| Cow position: | chr29:31813860-31814007 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 49 |
| Conread position: | 351-501 |
| Cow position: | chr29:8005005-8004860 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 70, 50 |
| Conread position: | 352-498 |
| Cow position: | chr29:22519211-22519063 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 119 |
| Conread position: | 360-501 |
| Cow position: | chr29:5210413-5210558 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 35, 120 |
| Conread position: | 361-503 |
| Cow position: | chr29:23825596-23825742 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 38 |
Show alignments to all cow chromosomes.