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Cow genome map

           
Conread name:
           
rpfco0121_d19.y1
        

               
Conread position:
               
1-240
               

               
Cow position:
               
chr6:42420883-42421127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr6:32854644-32854392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr6:39358720-39358423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 72
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr6:6167013-6167318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr6:49411064-49410770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 72
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr6:10612472-10612781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr6:50120171-50119858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr6:10649409-10649091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr6:46666722-46667087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr6:24327526-24327136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr6:58075837-58076283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 78
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr6:47540140-47540585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr6:16410813-16411252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 54
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr6:642978-642496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 72
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chr6:3979046-3978587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 70
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr6:606878-607353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 35
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr6:44098703-44099178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr6:46292710-46292248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr6:4468375-4468869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr6:10695475-10695964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:6068073-6067593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 73
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:9008984-9008503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 15
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:16699886-16700370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 62
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:16706625-16707121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 72
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:18049410-18048915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 72
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:24781954-24781450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:35725702-35726203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:47339748-47339247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:51674525-51675018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr6:67214357-67214858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr6:39093378-39093861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr6:40031808-40032300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr6:1887032-1886556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 72
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr6:5095935-5095431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 56
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr6:11169323-11169812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr6:17556990-17557492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 72
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr6:18987835-18988319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 55
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr6:42565300-42565799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 73
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr6:53933233-53932736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 51
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr6:8562331-8562833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 70
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr6:52478827-52478298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr6:37331578-37331883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 73
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr6:32211010-32210620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
2-499
               

               
Cow position:
               
chr6:35103706-35103221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 25
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr6:17090203-17090707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr6:36470951-36470453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 77
               

               
Conread position:
               
2-503
               

               
Cow position:
               
chr6:61631997-61631498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 71
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr6:21312139-21311764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 69
               

               
Conread position:
               
3-481
               

               
Cow position:
               
chr6:34075643-34076120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
3-487
               

               
Cow position:
               
chr6:31636077-31635593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
3-501
               

               
Cow position:
               
chr6:25407787-25407282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 49
               

               
Conread position:
               
3-501
               

               
Cow position:
               
chr6:36652041-36652531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 76
               

               
Conread position:
               
3-505
               

               
Cow position:
               
chr6:65870643-65871149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr6:5958397-5957975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
5-501
               

               
Cow position:
               
chr6:14958723-14958231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 68
               

               
Conread position:
               
6-288
               

               
Cow position:
               
chr6:22877531-22877239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr6:8804918-8804439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
11-491
               

               
Cow position:
               
chr6:32287244-32287738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 62
               

               
Conread position:
               
15-241
               

               
Cow position:
               
chr6:16492277-16492053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
183, 59
               

               
Conread position:
               
16-286
               

               
Cow position:
               
chr6:4864908-4864628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
138, 55
               

               
Conread position:
               
16-497
               

               
Cow position:
               
chr6:52248492-52248025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
113, 57
               

               
Conread position:
               
26-286
               

               
Cow position:
               
chr6:16397540-16397266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
38-501
               

               
Cow position:
               
chr6:15305241-15305677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 35
               

               
Conread position:
               
43-287
               

               
Cow position:
               
chr6:66532145-66531900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 30
               

               
Conread position:
               
44-501
               

               
Cow position:
               
chr6:15242511-15242945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
46-501
               

               
Cow position:
               
chr6:54867179-54867626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 27
               

               
Conread position:
               
50-505
               

               
Cow position:
               
chr6:44078181-44078627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
52-300
               

               
Cow position:
               
chr6:35842327-35842584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
54-281
               

               
Cow position:
               
chr6:28148512-28148754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
54-501
               

               
Cow position:
               
chr6:10176630-10176193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 19
               

               
Conread position:
               
56-287
               

               
Cow position:
               
chr6:54140489-54140729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
138, 14
               

               
Conread position:
               
59-286
               

               
Cow position:
               
chr6:3936220-3936461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
64-300
               

               
Cow position:
               
chr6:12116372-12116117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 9
               

               
Conread position:
               
67-474
               

               
Cow position:
               
chr6:50446079-50445685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 206
               

               
Conread position:
               
68-503
               

               
Cow position:
               
chr6:19681835-19681414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 93
               

               
Conread position:
               
73-302
               

               
Cow position:
               
chr6:6117870-6117614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
80-298
               

               
Cow position:
               
chr6:5329848-5330080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
74, 206
               

               
Conread position:
               
81-287
               

               
Cow position:
               
chr6:60467722-60467945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
87-300
               

               
Cow position:
               
chr6:53401071-53401298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
88-501
               

               
Cow position:
               
chr6:60057964-60057546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
90-503
               

               
Cow position:
               
chr6:63272914-63272501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 175
               

               
Conread position:
               
95-287
               

               
Cow position:
               
chr6:2423460-2423661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
95-498
               

               
Cow position:
               
chr6:34196440-34196044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
54, 164
               

               
Conread position:
               
97-287
               

               
Cow position:
               
chr6:62479455-62479244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
99-501
               

               
Cow position:
               
chr6:54369184-54368795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
100-287
               

               
Cow position:
               
chr6:6201161-6201360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
101-287
               

               
Cow position:
               
chr6:69500044-69500245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
101-501
               

               
Cow position:
               
chr6:57164141-57164538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
53, 150
               

               
Conread position:
               
106-293
               

               
Cow position:
               
chr6:32024618-32024409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
110-501
               

               
Cow position:
               
chr6:40713775-40713394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
42, 26
               

               
Conread position:
               
112-464
               

               
Cow position:
               
chr6:47150504-47150866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
42, 155
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr6:54365595-54365398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
115-503
               

               
Cow position:
               
chr6:50746705-50747108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 155
               

               
Conread position:
               
117-496
               

               
Cow position:
               
chr6:61515467-61515084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 162
               

               
Conread position:
               
119-302
               

               
Cow position:
               
chr6:17068086-17067884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
123-287
               

               
Cow position:
               
chr6:35769746-35769561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
128-499
               

               
Cow position:
               
chr6:64449133-64449484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
20, 149
               

               
Conread position:
               
130-294
               

               
Cow position:
               
chr6:32335563-32335727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 87
               

               
Conread position:
               
132-503
               

               
Cow position:
               
chr6:3952270-3952629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 94
               

               
Conread position:
               
135-503
               

               
Cow position:
               
chr6:11829914-11830300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
19, 206
               

               
Conread position:
               
138-397
               

               
Cow position:
               
chr6:3719257-3718972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 229
               

               
Conread position:
               
138-503
               

               
Cow position:
               
chr6:27110344-27110708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
139-501
               

               
Cow position:
               
chr6:54132571-54132922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
146-453
               

               
Cow position:
               
chr6:62967125-62966802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 146
               

               
Conread position:
               
147-501
               

               
Cow position:
               
chr6:54991229-54990892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
255, 98
               

               
Conread position:
               
147-503
               

               
Cow position:
               
chr6:41375516-41375880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
152-503
               

               
Cow position:
               
chr6:50983976-50984333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
153-503
               

               
Cow position:
               
chr6:34475774-34475450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 42
               

               
Conread position:
               
156-467
               

               
Cow position:
               
chr6:68049208-68049507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
156-499
               

               
Cow position:
               
chr6:60350527-60350185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
156-501
               

               
Cow position:
               
chr6:16103430-16103088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
42, 111
               

               
Conread position:
               
157-458
               

               
Cow position:
               
chr6:49685358-49685649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
157-499
               

               
Cow position:
               
chr6:54490967-54490628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
32, 148
               

               
Conread position:
               
157-501
               

               
Cow position:
               
chr6:45065233-45064908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
264, 66
               

               
Conread position:
               
159-501
               

               
Cow position:
               
chr6:14949706-14949372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
160-501
               

               
Cow position:
               
chr6:7190343-7190010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
161-458
               

               
Cow position:
               
chr6:60239611-60239328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
161-473
               

               
Cow position:
               
chr6:21542097-21542405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
162-501
               

               
Cow position:
               
chr6:38207717-38207381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
163-503
               

               
Cow position:
               
chr6:51893734-51893389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 77
               

               
Conread position:
               
164-371
               

               
Cow position:
               
chr6:7694573-7694369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 67
               

               
Conread position:
               
164-501
               

               
Cow position:
               
chr6:55282509-55282184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
165-287
               

               
Cow position:
               
chr6:5462267-5462133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
167-498
               

               
Cow position:
               
chr6:60442202-60442515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
167-503
               

               
Cow position:
               
chr6:8965873-8966208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 111
               

               
Conread position:
               
169-503
               

               
Cow position:
               
chr6:22503133-22502800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
172-485
               

               
Cow position:
               
chr6:57405336-57405032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
177-505
               

               
Cow position:
               
chr6:19695600-19695919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
178-503
               

               
Cow position:
               
chr6:6098488-6098155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 144
               

               
Conread position:
               
178-503
               

               
Cow position:
               
chr6:52412652-52412970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
194-488
               

               
Cow position:
               
chr6:53519809-53519528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 57
               

               
Conread position:
               
208-452
               

               
Cow position:
               
chr6:40834639-40834407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
212, 41
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chr6:35993411-35993695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 46
               

               
Conread position:
               
209-450
               

               
Cow position:
               
chr6:61137206-61137434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chr6:9838997-9839240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
209-503
               

               
Cow position:
               
chr6:30973876-30974153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
212, 36
               

               
Conread position:
               
210-471
               

               
Cow position:
               
chr6:44984162-44984413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
211, 38
               

               
Conread position:
               
211-490
               

               
Cow position:
               
chr6:59108779-59109043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
200, 46
               

               
Conread position:
               
214-501
               

               
Cow position:
               
chr6:5114207-5113944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
215-489
               

               
Cow position:
               
chr6:11246605-11246861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
188, 36
               

               
Conread position:
               
223-471
               

               
Cow position:
               
chr6:58370593-58370838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
190, 43
               

               
Conread position:
               
288-503
               

               
Cow position:
               
chr6:12092095-12091882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
132, 9
               

               
Conread position:
               
296-458
               

               
Cow position:
               
chr6:49694285-49694446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
296-465
               

               
Cow position:
               
chr6:37199626-37199453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
297-498
               

               
Cow position:
               
chr6:60667326-60667519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
305-489
               

               
Cow position:
               
chr6:54365090-54364895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
97, 175
               

               
Conread position:
               
307-503
               

               
Cow position:
               
chr6:12845300-12845486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
313-502
               

               
Cow position:
               
chr6:15447282-15447088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
93, 167
               

               
Conread position:
               
321-501
               

               
Cow position:
               
chr6:28318333-28318506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 78
               

               
Conread position:
               
322-499
               

               
Cow position:
               
chr6:57546290-57546122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 77
               

               
Conread position:
               
322-499
               

               
Cow position:
               
chr6:66874280-66874458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr6:4383416-4383588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr6:8788107-8787928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr6:12543003-12542821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
322-501
               

               
Cow position:
               
chr6:22985928-22985746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 150
               

               
Conread position:
               
322-503
               

               
Cow position:
               
chr6:38771216-38771391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
322-505
               

               
Cow position:
               
chr6:50467067-50467248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 44
               

               
Conread position:
               
323-501
               

               
Cow position:
               
chr6:67281828-67282003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
100, 65
               

               
Conread position:
               
323-503
               

               
Cow position:
               
chr6:4559373-4559193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
324-441
               

               
Cow position:
               
chr6:357956-357836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
324-458
               

               
Cow position:
               
chr6:38233890-38234026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
324-459
               

               
Cow position:
               
chr6:30688680-30688547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
324-463
               

               
Cow position:
               
chr6:59296938-59297070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
324-464
               

               
Cow position:
               
chr6:6673036-6673175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
97, 86
               

               
Conread position:
               
324-468
               

               
Cow position:
               
chr6:48803704-48803556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
324-469
               

               
Cow position:
               
chr6:40761057-40761203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
324-471
               

               
Cow position:
               
chr6:19012999-19013151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 76
               

               
Conread position:
               
324-471
               

               
Cow position:
               
chr6:28148767-28148915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-479
               

               
Cow position:
               
chr6:16191606-16191765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 69
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr6:21514681-21514502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 69
               

               
Conread position:
               
324-498
               

               
Cow position:
               
chr6:55209491-55209663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
97, 61
               

               
Conread position:
               
324-500
               

               
Cow position:
               
chr6:23402058-23401885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:2623714-2623882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
99, 69
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:5302484-5302311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:13565016-13565195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
80, 136
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:15300886-15300724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:22525264-22525438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 75
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:33509722-33509895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:35990301-35990125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 33
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:38441108-38441281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:38614748-38614921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:46865657-46865483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 64
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:47355756-47355931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:56849944-56850128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
77, 158
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:59718728-59718905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 144
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:60118082-60118259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:60739948-60740123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
97, 75
               

               
Conread position:
               
324-501
               

               
Cow position:
               
chr6:66131238-66131415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
324-502
               

               
Cow position:
               
chr6:66531889-66531712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
96, 49
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:377062-377236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:4692047-4691864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 155
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:8599937-8600110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:16261718-16261889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:16288120-16287950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
97, 73
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:17334121-17333942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 71
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:17549049-17548863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
73, 158
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:17794823-17794653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:19446191-19446361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:27240074-27239895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:29239872-29240050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:38609901-38610079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:54208205-54208024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
78, 147
               

               
Conread position:
               
324-503
               

               
Cow position:
               
chr6:55763787-55763964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
324-504
               

               
Cow position:
               
chr6:20206209-20206387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
324-504
               

               
Cow position:
               
chr6:25008642-25008831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
324-504
               

               
Cow position:
               
chr6:37149120-37149301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 146
               

               
Conread position:
               
324-505
               

               
Cow position:
               
chr6:16266654-16266837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 147
               

               
Conread position:
               
325-485
               

               
Cow position:
               
chr6:26765081-26764925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 62
               

               
Conread position:
               
325-498
               

               
Cow position:
               
chr6:51835331-51835505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
325-500
               

               
Cow position:
               
chr6:17313667-17313843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
325-501
               

               
Cow position:
               
chr6:19292732-19292910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
325-501
               

               
Cow position:
               
chr6:31564406-31564229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 121
               

               
Conread position:
               
325-501
               

               
Cow position:
               
chr6:47799225-47799402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
325-503
               

               
Cow position:
               
chr6:582339-582162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
325-503
               

               
Cow position:
               
chr6:36284175-36284354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 73
               

               
Conread position:
               
325-505
               

               
Cow position:
               
chr6:37395475-37395288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
68, 151
               

               
Conread position:
               
326-450
               

               
Cow position:
               
chr6:19351220-19351099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
326-459
               

               
Cow position:
               
chr6:28179012-28178879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
326-467
               

               
Cow position:
               
chr6:46998205-46998063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
326-501
               

               
Cow position:
               
chr6:4864614-4864438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
326-501
               

               
Cow position:
               
chr6:21061953-21061777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 136
               

               
Conread position:
               
326-501
               

               
Cow position:
               
chr6:38641428-38641601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr6:14914307-14914125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 118
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr6:36189632-36189808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
326-503
               

               
Cow position:
               
chr6:61142630-61142451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
95, 145
               

               
Conread position:
               
327-503
               

               
Cow position:
               
chr6:44867605-44867432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
327-503
               

               
Cow position:
               
chr6:65264603-65264435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
328-498
               

               
Cow position:
               
chr6:4389844-4390019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
328-501
               

               
Cow position:
               
chr6:23353489-23353659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 65
               

               
Conread position:
               
328-501
               

               
Cow position:
               
chr6:60468173-60468347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 148
               

               
Conread position:
               
328-503
               

               
Cow position:
               
chr6:40050005-40050186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
329-503
               

               
Cow position:
               
chr6:5845235-5845060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
330-454
               

               
Cow position:
               
chr6:6470703-6470578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
330-501
               

               
Cow position:
               
chr6:52901172-52901347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 143
               

               
Conread position:
               
332-501
               

               
Cow position:
               
chr6:59603271-59603099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
336-502
               

               
Cow position:
               
chr6:17527644-17527479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
336-503
               

               
Cow position:
               
chr6:2584885-2585053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
337-501
               

               
Cow position:
               
chr6:68652408-68652242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
338-504
               

               
Cow position:
               
chr6:16352401-16352242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
349-500
               

               
Cow position:
               
chr6:55535792-55535642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
72, 50
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr6:611508-611660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
57, 29
               

               
Conread position:
               
353-496
               

               
Cow position:
               
chr6:28973074-28972932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
353-501
               

               
Cow position:
               
chr6:7119659-7119510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
359-493
               

               
Cow position:
               
chr6:8094324-8094188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
361-499
               

               
Cow position:
               
chr6:19131398-19131537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 107
               
Show alignments to all cow chromosomes.