Cow genome map
Conread name: | rpfco0123_l11.y1 |
Conread position: | 1-287 |
Cow position: | chr11:2286018-2285716 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:4596872-4596570 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 216 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:4734588-4734286 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 216 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:10871520-10871822 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:15047762-15047462 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 214 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 13, 56 |
Conread position: | 1-287 |
Cow position: | chr11:17549463-17549161 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 215 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:20285313-20285615 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:22617641-22617943 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 214 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:24333688-24333990 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:24397093-24397395 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:30088181-30087879 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 10, 230 |
Conread position: | 1-287 |
Cow position: | chr11:30777268-30776966 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:30929687-30929385 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:32455359-32455057 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 212 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:33189876-33189574 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:41260624-41260925 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 221 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 13, 81 |
Conread position: | 1-287 |
Cow position: | chr11:46142684-46142983 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 215 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 13, 63 |
Conread position: | 1-287 |
Cow position: | chr11:47573231-47573533 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 221 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 181 |
Conread position: | 1-287 |
Cow position: | chr11:50282105-50282407 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 216 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 13, 233 |
Conread position: | 1-287 |
Cow position: | chr11:51034581-51034279 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:54302842-54302540 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 219 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:57624882-57625187 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 218 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 14, 233 |
Conread position: | 1-287 |
Cow position: | chr11:58137021-58136720 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 213 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 13, 73 |
Conread position: | 1-287 |
Cow position: | chr11:65760302-65760603 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 217 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-287 |
Cow position: | chr11:67453958-67453658 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 218 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 13, 219 |
Conread position: | 1-287 |
Cow position: | chr11:72369356-72369057 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 203 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 13, 227 |
Conread position: | 1-287 |
Cow position: | chr11:75256495-75256193 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 217 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-288 |
Cow position: | chr11:75710948-75711251 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 220 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-291 |
Cow position: | chr11:6343764-6343458 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 226 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-291 |
Cow position: | chr11:15988602-15988287 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 224 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 13, 239 |
Conread position: | 1-291 |
Cow position: | chr11:17104401-17104703 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 218 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 13, 176 |
Conread position: | 1-291 |
Cow position: | chr11:20730918-20731223 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 226 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 13, 147 |
Conread position: | 1-291 |
Cow position: | chr11:26121618-26121921 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 217 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 13, 79 |
Conread position: | 1-291 |
Cow position: | chr11:26592472-26592778 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 226 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 13, 225 |
Conread position: | 1-291 |
Cow position: | chr11:35142030-35142333 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 218 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 13, 77 |
Conread position: | 1-291 |
Cow position: | chr11:41093561-41093863 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 226 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 20, 62 |
Conread position: | 1-291 |
Cow position: | chr11:52846780-52846474 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 220 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 13, 230 |
Conread position: | 1-295 |
Cow position: | chr11:51289858-51289554 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 212 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 10, 63 |
Conread position: | 1-296 |
Cow position: | chr11:43917739-43917428 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 224 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 13, 231 |
Conread position: | 1-296 |
Cow position: | chr11:59872110-59871809 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 60 |
Conread position: | 1-297 |
Cow position: | chr11:52297860-52298170 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 223 |
Conread position: | 1-297 |
Cow position: | chr11:58399624-58399325 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 221 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 11, 48 |
Conread position: | 1-297 |
Cow position: | chr11:67920037-67920346 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 227 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 13, 226 |
Conread position: | 1-297 |
Cow position: | chr11:75510895-75511195 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 233 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 11, 73 |
Conread position: | 1-315 |
Cow position: | chr11:66664115-66664445 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 238 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 13, 210 |
Conread position: | 2-287 |
Cow position: | chr11:2800956-2801256 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 217 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 12, 228 |
Conread position: | 2-291 |
Cow position: | chr11:21852940-21853252 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 230 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 10, 231 |
Conread position: | 2-291 |
Cow position: | chr11:31836488-31836183 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 225 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 12, 224 |
Conread position: | 5-297 |
Cow position: | chr11:15995807-15995486 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 226 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 34, 231 |
Conread position: | 6-287 |
Cow position: | chr11:61131656-61131950 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 213 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 5, 222 |
Conread position: | 6-291 |
Cow position: | chr11:63860347-63860644 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 218 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 5, 222 |
Conread position: | 6-297 |
Cow position: | chr11:49935455-49935755 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 119, 213 |
Conread position: | 9-291 |
Cow position: | chr11:84967398-84967107 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 211 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 107, 215 |
Conread position: | 9-297 |
Cow position: | chr11:12762905-12763187 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 216 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 22, 54 |
Conread position: | 9-297 |
Cow position: | chr11:30057492-30057199 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 191 |
Conread position: | 12-287 |
Cow position: | chr11:17854381-17854097 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 203 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 104, 212 |
Conread position: | 12-287 |
Cow position: | chr11:28125800-28125518 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 201 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 104, 212 |
Conread position: | 12-290 |
Cow position: | chr11:30255728-30255437 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 209 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 19, 215 |
Conread position: | 12-296 |
Cow position: | chr11:4206468-4206168 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 216 |
Conread position: | 12-297 |
Cow position: | chr11:44233696-44233416 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 221 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 180, 74 |
Conread position: | 15-287 |
Cow position: | chr11:7152280-7152003 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 208 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 107, 96 |
Conread position: | 15-287 |
Cow position: | chr11:8366844-8366563 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 201 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 101, 209 |
Conread position: | 15-287 |
Cow position: | chr11:10698462-10698743 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 202 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 101, 209 |
Conread position: | 15-291 |
Cow position: | chr11:3238586-3238300 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 207 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 101, 215 |
Conread position: | 15-291 |
Cow position: | chr11:15495672-15495387 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 205 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 101, 209 |
Conread position: | 15-297 |
Cow position: | chr11:14469785-14469502 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 195 |
Conread position: | 15-297 |
Cow position: | chr11:73513085-73513379 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 84 |
Conread position: | 15-297 |
Cow position: | chr11:84774450-84774158 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 100 |
Conread position: | 16-297 |
Cow position: | chr11:53280113-53280407 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 227 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 206 |
Conread position: | 26-287 |
Cow position: | chr11:24045488-24045757 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 195 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 90, 31 |
Conread position: | 26-291 |
Cow position: | chr11:3796487-3796234 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 197 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 173, 91 |
Conread position: | 26-291 |
Cow position: | chr11:9388609-9388336 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 196 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 90, 71 |
Conread position: | 26-291 |
Cow position: | chr11:9432648-9432378 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 205 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 78, 150 |
Conread position: | 26-291 |
Cow position: | chr11:19060801-19061075 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 198 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 90, 198 |
Conread position: | 26-291 |
Cow position: | chr11:63390209-63390483 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 199 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 90, 198 |
Conread position: | 26-291 |
Cow position: | chr11:74990894-74990619 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 201 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 36, 199 |
Conread position: | 26-294 |
Cow position: | chr11:42793664-42793938 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 152 |
Conread position: | 26-295 |
Cow position: | chr11:21728746-21729025 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 122 |
Conread position: | 29-291 |
Cow position: | chr11:14649971-14650237 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 208 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 86, 16 |
Conread position: | 29-297 |
Cow position: | chr11:10365132-10365403 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 207 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 82, 137 |
Conread position: | 31-297 |
Cow position: | chr11:3230589-3230313 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 189 |
Conread position: | 37-290 |
Cow position: | chr11:25760004-25759743 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 191 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 79, 186 |
Conread position: | 37-291 |
Cow position: | chr11:31833999-31834262 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 191 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 79, 187 |
Conread position: | 37-297 |
Cow position: | chr11:32762713-32762445 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 196 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 79, 104 |
Conread position: | 53-287 |
Cow position: | chr11:24493562-24493805 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 177 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 63, 171 |
Conread position: | 112-296 |
Cow position: | chr11:18146357-18146556 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 62, 120 |
Show alignments to all cow chromosomes.