Cow genome map
| Conread name: | rpfco0123_l11.y1 |
| Conread position: | 1-286 |
| Cow position: | chr14:13582116-13581818 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 1-287 |
| Cow position: | chr14:5112891-5113193 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:8396530-8396832 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:19524302-19524000 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:21765449-21765147 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:22612452-22612754 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:24895920-24895619 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 20, 235 |
| Conread position: | 1-287 |
| Cow position: | chr14:28350451-28350750 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 1-287 |
| Cow position: | chr14:32500411-32500120 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 211 |
| Conread position: | 1-287 |
| Cow position: | chr14:34168548-34168246 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:38237845-38238148 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-287 |
| Cow position: | chr14:38652161-38651859 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:40483212-40483514 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr14:40969396-40969103 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 22 |
| Conread position: | 1-287 |
| Cow position: | chr14:46125797-46125495 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr14:9483197-9482895 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 13, 169 |
| Conread position: | 1-291 |
| Cow position: | chr14:10349612-10349917 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 1-291 |
| Cow position: | chr14:19324096-19324387 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr14:21201166-21200865 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 1-291 |
| Cow position: | chr14:21728269-21727967 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 13, 77 |
| Conread position: | 1-291 |
| Cow position: | chr14:30476094-30476399 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 13, 235 |
| Conread position: | 1-291 |
| Cow position: | chr14:30581215-30581520 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-291 |
| Cow position: | chr14:31156075-31155770 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 13, 169 |
| Conread position: | 1-291 |
| Cow position: | chr14:31737229-31736923 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr14:34906775-34906469 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 10, 236 |
| Conread position: | 1-291 |
| Cow position: | chr14:35420107-35419811 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 1-291 |
| Cow position: | chr14:41081392-41081699 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 236 |
| Conread position: | 1-291 |
| Cow position: | chr14:44367924-44367621 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 13, 227 |
| Conread position: | 1-293 |
| Cow position: | chr14:11150666-11150974 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 1-293 |
| Cow position: | chr14:21534381-21534077 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 1-293 |
| Cow position: | chr14:38391490-38391185 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 1-295 |
| Cow position: | chr14:12483648-12483341 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 141 |
| Conread position: | 1-295 |
| Cow position: | chr14:12545931-12545608 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 232 |
| Conread position: | 1-295 |
| Cow position: | chr14:45292217-45291928 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 39 |
| Conread position: | 1-296 |
| Cow position: | chr14:7647374-7647053 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 11, 235 |
| Conread position: | 1-297 |
| Cow position: | chr14:45576865-45576584 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 2-297 |
| Cow position: | chr14:38406228-38405920 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 30, 102 |
| Conread position: | 6-291 |
| Cow position: | chr14:10541653-10541945 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 5, 136 |
| Conread position: | 6-297 |
| Cow position: | chr14:8495693-8495985 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 186, 104 |
| Conread position: | 12-291 |
| Cow position: | chr14:1661658-1661380 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 180, 100 |
| Conread position: | 15-287 |
| Cow position: | chr14:37444197-37443916 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-291 |
| Cow position: | chr14:2289476-2289197 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-291 |
| Cow position: | chr14:10310788-10310503 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 101, 215 |
| Conread position: | 15-291 |
| Cow position: | chr14:12066215-12066504 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 34, 208 |
| Conread position: | 15-291 |
| Cow position: | chr14:22689670-22689952 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 15-291 |
| Cow position: | chr14:29044441-29044729 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 16, 212 |
| Conread position: | 15-291 |
| Cow position: | chr14:45025400-45025685 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-293 |
| Cow position: | chr14:37334758-37335034 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 99, 123 |
| Conread position: | 15-297 |
| Cow position: | chr14:13810808-13811098 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 26-291 |
| Cow position: | chr14:1727362-1727090 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 90, 103 |
| Conread position: | 26-291 |
| Cow position: | chr14:17488120-17488395 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 78, 199 |
| Conread position: | 26-291 |
| Cow position: | chr14:17762170-17762444 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 198 |
| Conread position: | 26-291 |
| Cow position: | chr14:30593040-30593322 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 165 |
| Conread position: | 26-291 |
| Cow position: | chr14:34394950-34394677 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 198 |
| Conread position: | 26-291 |
| Cow position: | chr14:50141807-50142080 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 90, 41 |
| Conread position: | 37-287 |
| Cow position: | chr14:4916580-4916839 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 37-291 |
| Cow position: | chr14:403372-403108 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 86, 188 |
| Conread position: | 37-291 |
| Cow position: | chr14:38016759-38016494 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 184 |
| Conread position: | 40-291 |
| Cow position: | chr14:38436228-38435975 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 76, 118 |
| Conread position: | 44-287 |
| Cow position: | chr14:13105141-13104889 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 72, 181 |
| Conread position: | 50-287 |
| Cow position: | chr14:24973431-24973677 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 174 |
| Conread position: | 50-297 |
| Cow position: | chr14:33834815-33835071 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 195 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 57, 168 |
| Conread position: | 67-291 |
| Cow position: | chr14:34370709-34370478 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 67-297 |
| Cow position: | chr14:33714156-33713921 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 45, 185 |
| Conread position: | 69-287 |
| Cow position: | chr14:34763904-34763677 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 155 |
| Conread position: | 112-287 |
| Cow position: | chr14:35497650-35497466 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 112 |
Show alignments to all cow chromosomes.