Cow genome map


           Conread name:
           rpfco0123_l11.y1
        

               Conread position:
               1-286
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 219
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               13, 218
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               13, 165
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               13, 210
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               14, 228
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               10, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               13, 231
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 151
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 233
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 231
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 117
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 225
               

               Conread position:
               6-287
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               5, 221
               

               Conread position:
               6-296
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               96, 195
               

               Conread position:
               7-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               88, 222
               

               Conread position:
               12-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               104, 45
               

               Conread position:
               12-292
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               12-297
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               105, 59
               

               Conread position:
               13-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 201
               

               Conread position:
               15-290
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 99
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               172, 154
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               177, 214
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               101, 204
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               106, 82
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-298
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               101, 82
               

               Conread position:
               20-291
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 168
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               90, 198
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               166, 84
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 198
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               163, 197
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               90, 199
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               95, 202
               

               Conread position:
               29-297
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               29-297
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               29-297
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               37-287
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               37-287
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               79, 193
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               37-297
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               78, 104
               

               Conread position:
               40-297
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               76, 184
               

               Conread position:
               45-287
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               54, 181
               

               Conread position:
               49-291
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               72, 63
               

               Conread position:
               50-297
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               45, 164
               

               Conread position:
               56-300
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               60-287
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               56, 164
               

               Conread position:
               63-287
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 161
               

               Conread position:
               78-295
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               38, 143
               

               Conread position:
               84-297
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               108, 40
               

               Conread position:
               90-297
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               102, 20
               

               Conread position:
               112-297
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 118
               
Show alignments to all cow chromosomes.