Cow genome map
| Conread name: | rpfco0123_l11.y1 |
| Conread position: | 1-287 |
| Cow position: | chr18:13270591-13270297 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 1-287 |
| Cow position: | chr18:21579865-21580167 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr18:24037162-24037459 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 13, 225 |
| Conread position: | 1-287 |
| Cow position: | chr18:42629053-42628751 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr18:51580096-51580398 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 13, 225 |
| Conread position: | 1-287 |
| Cow position: | chr18:51690486-51690184 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr18:54047568-54047266 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr18:55436445-55436747 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr18:10292417-10292114 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 10, 227 |
| Conread position: | 1-291 |
| Cow position: | chr18:19356196-19355896 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 13, 164 |
| Conread position: | 1-291 |
| Cow position: | chr18:26242771-26243075 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 20, 234 |
| Conread position: | 1-291 |
| Cow position: | chr18:43473275-43472981 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 1-291 |
| Cow position: | chr18:47745442-47745136 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr18:50092756-50093061 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 1-291 |
| Cow position: | chr18:51345977-51345671 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr18:52574790-52574484 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 10, 230 |
| Conread position: | 1-296 |
| Cow position: | chr18:12269844-12269531 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 1-296 |
| Cow position: | chr18:29797395-29797707 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 11, 226 |
| Conread position: | 1-296 |
| Cow position: | chr18:42080331-42080643 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 1-296 |
| Cow position: | chr18:51272449-51272758 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 1-297 |
| Cow position: | chr18:6103730-6104024 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 1-297 |
| Cow position: | chr18:15172520-15172225 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 51 |
| Conread position: | 1-297 |
| Cow position: | chr18:33158211-33157913 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 1-297 |
| Cow position: | chr18:33406980-33406685 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 1-297 |
| Cow position: | chr18:53872564-53872269 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 19, 95 |
| Conread position: | 2-297 |
| Cow position: | chr18:44261744-44261445 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 34 |
| Conread position: | 6-296 |
| Cow position: | chr18:20151267-20150985 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 186, 54 |
| Conread position: | 15-287 |
| Cow position: | chr18:11870155-11869874 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-287 |
| Cow position: | chr18:19461948-19461667 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-287 |
| Cow position: | chr18:31139417-31139139 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 101, 163 |
| Conread position: | 15-287 |
| Cow position: | chr18:51601994-51602278 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 15, 212 |
| Conread position: | 15-291 |
| Cow position: | chr18:51698310-51698023 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 15-293 |
| Cow position: | chr18:35443709-35443987 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-296 |
| Cow position: | chr18:21304172-21303880 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 130, 74 |
| Conread position: | 15-296 |
| Cow position: | chr18:43464099-43464394 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 17, 216 |
| Conread position: | 15-297 |
| Cow position: | chr18:2853120-2853410 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 209 |
| Conread position: | 15-297 |
| Cow position: | chr18:35012983-35013272 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 97, 54 |
| Conread position: | 46-297 |
| Cow position: | chr18:16025018-16025281 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 185 |
| Conread position: | 62-297 |
| Cow position: | chr18:45905246-45905496 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 68-287 |
| Cow position: | chr18:19462847-19463075 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 156 |
| Conread position: | 75-290 |
| Cow position: | chr18:32164323-32164547 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 91-296 |
| Cow position: | chr18:10890329-10890136 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 164, 21 |
Show alignments to all cow chromosomes.