Cow genome map
| Conread name: | rpfco0123_l11.y1 |
| Conread position: | 1-287 |
| Cow position: | chr19:42029-41726 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-287 |
| Cow position: | chr19:3406875-3406573 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr19:10196103-10195806 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 74 |
| Conread position: | 1-287 |
| Cow position: | chr19:10613923-10613621 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-287 |
| Cow position: | chr19:26518641-26518938 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 1-287 |
| Cow position: | chr19:29394037-29393735 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-287 |
| Cow position: | chr19:30037212-30037514 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr19:30515347-30515649 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr19:41204532-41204834 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr19:48626750-48626452 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 1-287 |
| Cow position: | chr19:55843689-55843397 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 13, 176 |
| Conread position: | 1-291 |
| Cow position: | chr19:5902723-5902416 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-291 |
| Cow position: | chr19:12601009-12601315 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 219 |
| Conread position: | 1-291 |
| Cow position: | chr19:14180306-14180611 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 11, 225 |
| Conread position: | 1-291 |
| Cow position: | chr19:23488451-23488148 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 13, 184 |
| Conread position: | 1-291 |
| Cow position: | chr19:28794636-28794942 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 13, 236 |
| Conread position: | 1-291 |
| Cow position: | chr19:39750844-39750564 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 1-297 |
| Cow position: | chr19:4447907-4447598 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 1-297 |
| Cow position: | chr19:7065354-7065060 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 1-297 |
| Cow position: | chr19:29367223-29366911 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-297 |
| Cow position: | chr19:29624731-29624419 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-297 |
| Cow position: | chr19:39077128-39076829 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 75 |
| Conread position: | 1-297 |
| Cow position: | chr19:50561755-50561447 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 12-297 |
| Cow position: | chr19:35381402-35381688 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 15-287 |
| Cow position: | chr19:27081741-27082022 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-287 |
| Cow position: | chr19:55163983-55164264 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 101, 204 |
| Conread position: | 15-291 |
| Cow position: | chr19:777190-776901 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 156 |
| Conread position: | 15-291 |
| Cow position: | chr19:31782244-31781958 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 214 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 107, 97 |
| Conread position: | 15-291 |
| Cow position: | chr19:52147752-52148037 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-296 |
| Cow position: | chr19:46873350-46873641 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 212 |
| Conread position: | 15-297 |
| Cow position: | chr19:20403953-20403666 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 95 |
| Conread position: | 19-297 |
| Cow position: | chr19:7472720-7472442 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 23-295 |
| Cow position: | chr19:34985748-34985475 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 43, 95 |
| Conread position: | 26-287 |
| Cow position: | chr19:19389497-19389227 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 90, 198 |
| Conread position: | 26-287 |
| Cow position: | chr19:33528510-33528240 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 90, 198 |
| Conread position: | 26-287 |
| Cow position: | chr19:35782735-35783005 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 166, 198 |
| Conread position: | 26-287 |
| Cow position: | chr19:42274563-42274828 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 124, 72 |
| Conread position: | 26-296 |
| Cow position: | chr19:55421698-55421430 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 226, 78 |
| Conread position: | 29-294 |
| Cow position: | chr19:30937557-30937834 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 90, 193 |
| Conread position: | 36-291 |
| Cow position: | chr19:28450468-28450211 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 80, 218 |
| Conread position: | 37-287 |
| Cow position: | chr19:28597024-28596769 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 79, 121 |
| Conread position: | 37-291 |
| Cow position: | chr19:6752-6493 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 45-291 |
| Cow position: | chr19:3221747-3221501 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 147, 44 |
| Conread position: | 68-287 |
| Cow position: | chr19:8273452-8273680 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 156 |
| Conread position: | 93-297 |
| Cow position: | chr19:42867061-42866848 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 132 |
| Conread position: | 94-342 |
| Cow position: | chr19:23463498-23463751 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 97-296 |
| Cow position: | chr19:27347476-27347676 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 122 |
| Conread position: | 103-297 |
| Cow position: | chr19:1663651-1663455 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 89, 13 |
| Conread position: | 112-296 |
| Cow position: | chr19:14156532-14156723 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 80, 50 |
Show alignments to all cow chromosomes.