Cow genome map

Conread name: rpfco0123_l11.y1

Conread position: 1-287
Cow position: chr20:7081158-7081460 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:9223510-9223208 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 193

Conread position: 1-287
Cow position: chr20:10099781-10099479 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:13303641-13303942 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 78

Conread position: 1-287
Cow position: chr20:14924984-14925286 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:16558874-16559176 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:22049024-22048722 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:26052695-26052997 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:28324136-28323834 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:31504991-31504689 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:32451697-32451999 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr20:36310845-36311147 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr20:7597204-7597505 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 166

Conread position: 1-291
Cow position: chr20:8446070-8445764 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 13, 231

Conread position: 1-291
Cow position: chr20:8970250-8970541 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 63

Conread position: 1-291
Cow position: chr20:12333326-12333033 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 11, 227

Conread position: 1-291
Cow position: chr20:13505924-13506210 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 15, 115

Conread position: 1-291
Cow position: chr20:14836843-14836539 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 163

Conread position: 1-291
Cow position: chr20:16515981-16515675 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 13, 225

Conread position: 1-291
Cow position: chr20:24399208-24399513 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 1-291
Cow position: chr20:28443691-28443997 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr20:31261155-31260860 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 217
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 12, 128

Conread position: 1-291
Cow position: chr20:37154308-37154614 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 10, 230

Conread position: 1-296
Cow position: chr20:30777359-30777057 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 106

Conread position: 1-297
Cow position: chr20:4205304-4204995 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 60

Conread position: 1-297
Cow position: chr20:6097022-6097319 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 11, 79

Conread position: 1-297
Cow position: chr20:6258637-6258948 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 196

Conread position: 1-297
Cow position: chr20:14877716-14877406 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 14, 231

Conread position: 1-297
Cow position: chr20:18321912-18322211 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 1-300
Cow position: chr20:28956284-28956608 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 234

Conread position: 5-291
Cow position: chr20:22221958-22222252 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 205
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 82

Conread position: 12-297
Cow position: chr20:28113619-28113328 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 100

Conread position: 15-291
Cow position: chr20:6135354-6135639 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 101, 204

Conread position: 15-291
Cow position: chr20:12176853-12177138 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 209

Conread position: 15-291
Cow position: chr20:20439332-20439617 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 101, 209

Conread position: 15-291
Cow position: chr20:22185383-22185662 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 60

Conread position: 26-297
Cow position: chr20:3782075-3782358 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 71

Conread position: 29-295
Cow position: chr20:13660729-13660997 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 119, 21

Conread position: 36-291
Cow position: chr20:9339630-9339366 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 55, 182

Conread position: 37-287
Cow position: chr20:5503132-5503391 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 79, 187

Conread position: 40-287
Cow position: chr20:11331062-11331318 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 76, 135

Conread position: 42-291
Cow position: chr20:14327006-14327263 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 188

Conread position: 60-287
Cow position: chr20:30546939-30546703 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 164

Conread position: 64-297
Cow position: chr20:12155783-12156015 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 10, 150

Conread position: 90-295
Cow position: chr20:20364184-20364396 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 35

Conread position: 98-287
Cow position: chr20:19352524-19352713 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 44

Conread position: 102-296
Cow position: chr20:27993975-27994177 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 13, 0

Show alignments to all cow chromosomes.