Cow genome map


           Conread name:
           rpfco0123_l11.y1
        

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               13, 227
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               11, 242
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               11, 227
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               13, 210
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               13, 127
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 166
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               11, 165
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 92
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 243
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 155
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 252
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               229
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 225
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               27, 147
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 224
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 227
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 171
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               11, 102
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               30, 118
               

               Conread position:
               2-291
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               2-297
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 247
               

               Conread position:
               6-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               5, 183
               

               Conread position:
               9-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 103
               

               Conread position:
               11-296
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               88, 60
               

               Conread position:
               12-291
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 85
               

               Conread position:
               12-297
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 206
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               177, 97
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               16, 212
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               15-293
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               15-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               102, 154
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               18-291
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               13, 213
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 198
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               90, 133
               

               Conread position:
               26-296
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               88, 193
               

               Conread position:
               36-297
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 114
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               86, 176
               

               Conread position:
               37-296
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               82, 41
               

               Conread position:
               37-297
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 58
               

               Conread position:
               41-291
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 111
               

               Conread position:
               45-291
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               147, 53
               

               Conread position:
               50-291
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               69, 175
               

               Conread position:
               79-297
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               134-297
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               58, 90
               
Show alignments to all cow chromosomes.