Cow genome map
| Conread name: | rpfco0123_l11.y1 |
| Conread position: | 1-213 |
| Cow position: | chr23:25665232-25665440 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 1-287 |
| Cow position: | chr23:954212-954514 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr23:3549607-3549908 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 165 |
| Conread position: | 1-287 |
| Cow position: | chr23:4267024-4266722 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr23:9267274-9267576 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr23:10679245-10679547 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr23:25351948-25351646 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr23:41015517-41015215 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-289 |
| Cow position: | chr23:31606016-31605712 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr23:671758-671454 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 13, 228 |
| Conread position: | 1-291 |
| Cow position: | chr23:1310984-1311288 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 1-291 |
| Cow position: | chr23:2408626-2408930 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 185 |
| Conread position: | 1-291 |
| Cow position: | chr23:40773916-40773610 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 1-292 |
| Cow position: | chr23:5458327-5458020 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-296 |
| Cow position: | chr23:38934646-38934947 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-297 |
| Cow position: | chr23:1321808-1322120 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 225 |
| Conread position: | 1-297 |
| Cow position: | chr23:3167628-3167323 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 1-297 |
| Cow position: | chr23:17404195-17403890 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 1-297 |
| Cow position: | chr23:21772309-21772633 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 237 |
| Conread position: | 1-297 |
| Cow position: | chr23:31833404-31833727 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 11, 236 |
| Conread position: | 1-299 |
| Cow position: | chr23:1113540-1113226 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 3-291 |
| Cow position: | chr23:20025519-20025216 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 6-295 |
| Cow position: | chr23:6173450-6173742 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 9-295 |
| Cow position: | chr23:344893-345190 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 205 |
| Conread position: | 12-291 |
| Cow position: | chr23:8707961-8707673 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 212 |
| Conread position: | 15-287 |
| Cow position: | chr23:4581593-4581312 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-287 |
| Cow position: | chr23:31704465-31704181 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 212 |
| Conread position: | 15-291 |
| Cow position: | chr23:2320383-2320665 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 101, 160 |
| Conread position: | 15-292 |
| Cow position: | chr23:2472731-2473021 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 16, 214 |
| Conread position: | 15-297 |
| Cow position: | chr23:7360025-7359732 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 206 |
| Conread position: | 16-297 |
| Cow position: | chr23:6593362-6593649 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 94, 220 |
| Conread position: | 30-297 |
| Cow position: | chr23:25670226-25670504 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 132, 80 |
| Conread position: | 37-291 |
| Cow position: | chr23:15020463-15020199 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 37-291 |
| Cow position: | chr23:19493392-19493131 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 155, 61 |
| Conread position: | 43-291 |
| Cow position: | chr23:27313383-27313127 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 46-291 |
| Cow position: | chr23:28987878-28987625 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 53-287 |
| Cow position: | chr23:10674824-10674581 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 63, 171 |
| Conread position: | 54-291 |
| Cow position: | chr23:770960-771209 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 173 |
| Conread position: | 91-291 |
| Cow position: | chr23:40553632-40553840 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 7 |
Show alignments to all cow chromosomes.