Cow genome map
| Conread name: | rpfco0123_l11.y1 |
| Conread position: | 1-287 |
| Cow position: | chr25:15429302-15429604 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr25:17905018-17904716 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr25:19139194-19139496 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr25:27145800-27145501 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 1-287 |
| Cow position: | chr25:32610042-32610344 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr25:35554046-35553743 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 13, 231 |
| Conread position: | 1-291 |
| Cow position: | chr25:8655667-8655364 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 217 |
| Conread position: | 1-291 |
| Cow position: | chr25:9413721-9413419 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 1-291 |
| Cow position: | chr25:17994920-17995218 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 102 |
| Conread position: | 1-291 |
| Cow position: | chr25:19336949-19337253 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 13, 218 |
| Conread position: | 1-291 |
| Cow position: | chr25:26353411-26353712 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 30, 231 |
| Conread position: | 1-296 |
| Cow position: | chr25:9395789-9395476 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 120 |
| Conread position: | 1-296 |
| Cow position: | chr25:29312944-29313253 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 10, 171 |
| Conread position: | 1-297 |
| Cow position: | chr25:4522436-4522745 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 2-287 |
| Cow position: | chr25:11666039-11665747 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 6-296 |
| Cow position: | chr25:10012692-10012996 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 41, 217 |
| Conread position: | 13-291 |
| Cow position: | chr25:16922433-16922718 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 14-287 |
| Cow position: | chr25:17210776-17211058 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 102, 210 |
| Conread position: | 15-287 |
| Cow position: | chr25:3688492-3688211 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-287 |
| Cow position: | chr25:26705525-26705806 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-287 |
| Cow position: | chr25:29525510-29525791 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-291 |
| Cow position: | chr25:18190019-18190304 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 15-291 |
| Cow position: | chr25:18886127-18886409 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 101, 163 |
| Conread position: | 15-292 |
| Cow position: | chr25:36351098-36350809 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 16, 212 |
| Conread position: | 26-287 |
| Cow position: | chr25:26780740-26781010 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 198 |
| Conread position: | 26-291 |
| Cow position: | chr25:26923183-26922910 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 26-291 |
| Cow position: | chr25:40321944-40322218 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 71 |
| Conread position: | 37-291 |
| Cow position: | chr25:17585687-17585950 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 79, 190 |
| Conread position: | 37-296 |
| Cow position: | chr25:27018902-27019170 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 188 |
| Conread position: | 37-298 |
| Cow position: | chr25:23914002-23913735 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 104 |
| Conread position: | 40-287 |
| Cow position: | chr25:11125098-11124842 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 76, 184 |
| Conread position: | 44-287 |
| Cow position: | chr25:7223104-7223356 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 180 |
| Conread position: | 45-291 |
| Cow position: | chr25:18269801-18269544 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 147, 52 |
Show alignments to all cow chromosomes.