Cow genome map
| Conread name: | rpfco0123_l11.y1 |
| Conread position: | 1-287 |
| Cow position: | chr26:1342661-1342963 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:1346360-1346662 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 1-287 |
| Cow position: | chr26:1390616-1390314 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:3026806-3027107 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 1-287 |
| Cow position: | chr26:3564405-3564707 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:3833668-3833366 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:3862445-3862746 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:7558984-7559284 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 228 |
| Conread position: | 1-287 |
| Cow position: | chr26:7677368-7677066 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:8885476-8885175 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 229 |
| Conread position: | 1-287 |
| Cow position: | chr26:9115672-9115371 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 13, 210 |
| Conread position: | 1-287 |
| Cow position: | chr26:11537459-11537157 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:13183944-13183642 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:15146128-15145826 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:18803735-18804038 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:18928909-18928607 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 117 |
| Conread position: | 1-287 |
| Cow position: | chr26:20019727-20019433 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 1-287 |
| Cow position: | chr26:22692019-22691722 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 1-287 |
| Cow position: | chr26:26612090-26611788 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:30594006-30594297 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 21 |
| Conread position: | 1-287 |
| Cow position: | chr26:34265598-34265296 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr26:35121609-35121910 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 169 |
| Conread position: | 1-287 |
| Cow position: | chr26:35560429-35560729 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 185 |
| Conread position: | 1-291 |
| Cow position: | chr26:3097015-3097321 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr26:8873479-8873174 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 13, 181 |
| Conread position: | 1-291 |
| Cow position: | chr26:13806395-13806699 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 217 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 13, 181 |
| Conread position: | 1-291 |
| Cow position: | chr26:23890037-23889740 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 13, 177 |
| Conread position: | 1-291 |
| Cow position: | chr26:29433866-29433560 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 13, 225 |
| Conread position: | 1-295 |
| Cow position: | chr26:25393422-25393110 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 108 |
| Conread position: | 1-297 |
| Cow position: | chr26:6030369-6030670 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 13, 118 |
| Conread position: | 1-297 |
| Cow position: | chr26:14173692-14173385 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 1-297 |
| Cow position: | chr26:20256252-20255946 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 11, 103 |
| Conread position: | 1-297 |
| Cow position: | chr26:35190914-35191226 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 2-292 |
| Cow position: | chr26:12965243-12965527 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 139, 8 |
| Conread position: | 6-291 |
| Cow position: | chr26:800305-800006 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 5, 223 |
| Conread position: | 15-287 |
| Cow position: | chr26:4728711-4728992 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 210 |
| Conread position: | 15-287 |
| Cow position: | chr26:11296791-11297071 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 137 |
| Conread position: | 15-291 |
| Cow position: | chr26:387293-387008 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-291 |
| Cow position: | chr26:1885633-1885341 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 211 |
| Conread position: | 15-291 |
| Cow position: | chr26:12584925-12585210 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-291 |
| Cow position: | chr26:23591308-23591023 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 101, 210 |
| Conread position: | 15-297 |
| Cow position: | chr26:2739974-2740288 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 227 |
| Conread position: | 15-304 |
| Cow position: | chr26:16864888-16864587 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 82, 210 |
| Conread position: | 26-287 |
| Cow position: | chr26:8084428-8084158 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 96, 85 |
| Conread position: | 26-298 |
| Cow position: | chr26:10698915-10699181 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 204 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 95, 31 |
| Conread position: | 31-297 |
| Cow position: | chr26:9836069-9835793 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 197 |
| Conread position: | 37-287 |
| Cow position: | chr26:3231057-3230800 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 79, 176 |
| Conread position: | 37-287 |
| Cow position: | chr26:9070153-9069894 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 37-287 |
| Cow position: | chr26:30752748-30753007 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 37-289 |
| Cow position: | chr26:18857705-18857450 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 50-291 |
| Cow position: | chr26:17169408-17169158 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 66, 174 |
| Conread position: | 88-287 |
| Cow position: | chr26:783714-783923 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 22, 132 |
Show alignments to all cow chromosomes.