Cow genome map
| Conread name: | rpfco0123_l11.y1 |
| Conread position: | 1-287 |
| Cow position: | chr27:1521263-1520967 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr27:2001433-2001132 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 229 |
| Conread position: | 1-287 |
| Cow position: | chr27:8959428-8959729 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 103 |
| Conread position: | 1-287 |
| Cow position: | chr27:12006737-12006435 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-287 |
| Cow position: | chr27:22797070-22797372 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 230 |
| Conread position: | 1-287 |
| Cow position: | chr27:29035793-29036095 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr27:3653111-3653417 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr27:5983442-5983747 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 13, 57 |
| Conread position: | 1-291 |
| Cow position: | chr27:8973031-8972727 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 1-291 |
| Cow position: | chr27:10579532-10579230 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 169 |
| Conread position: | 1-291 |
| Cow position: | chr27:14297794-14297490 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 13, 228 |
| Conread position: | 1-291 |
| Cow position: | chr27:15272485-15272787 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 221 |
| Conread position: | 1-291 |
| Cow position: | chr27:15633758-15634059 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 218 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 30, 226 |
| Conread position: | 1-291 |
| Cow position: | chr27:16030808-16031114 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 230 |
| Conread position: | 1-291 |
| Cow position: | chr27:21452034-21451726 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 1-296 |
| Cow position: | chr27:27557387-27557080 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 227 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 1-297 |
| Cow position: | chr27:4829097-4828776 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 62 |
| Conread position: | 1-297 |
| Cow position: | chr27:19388601-19388919 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 137 |
| Conread position: | 1-297 |
| Cow position: | chr27:21392614-21392288 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 7-297 |
| Cow position: | chr27:21350425-21350124 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 24, 214 |
| Conread position: | 15-291 |
| Cow position: | chr27:344362-344647 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-291 |
| Cow position: | chr27:8427426-8427141 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 93, 161 |
| Conread position: | 15-291 |
| Cow position: | chr27:12239635-12239351 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 209 |
| Conread position: | 15-297 |
| Cow position: | chr27:14669773-14669467 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 16, 38 |
| Conread position: | 26-291 |
| Cow position: | chr27:8291406-8291124 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 87, 201 |
| Conread position: | 26-291 |
| Cow position: | chr27:15100196-15099925 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 37-287 |
| Cow position: | chr27:3650027-3649768 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 37-287 |
| Cow position: | chr27:9970717-9970458 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 40-297 |
| Cow position: | chr27:165377-165642 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 76, 121 |
| Conread position: | 42-291 |
| Cow position: | chr27:13353847-13353589 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 74, 182 |
| Conread position: | 54-297 |
| Cow position: | chr27:2848907-2849143 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 59, 26 |
| Conread position: | 66-297 |
| Cow position: | chr27:1502027-1501791 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 126, 44 |
| Conread position: | 66-297 |
| Cow position: | chr27:4824335-4824100 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 33, 47 |
Show alignments to all cow chromosomes.