Cow genome map


           Conread name:
           rpfco0123_l11.y1
        

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 229
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               13, 229
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               10, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               13, 229
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               191, 13
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 229
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 239
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               13, 158
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 232
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 179
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               10, 16
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 196
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 52
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 107
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 63
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               11, 103
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 71
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               6-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               186, 212
               

               Conread position:
               9-293
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 67
               

               Conread position:
               12-292
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               92, 207
               

               Conread position:
               12-295
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               12-297
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               104, 212
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               177, 61
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               107, 210
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               209
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 91
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 93
               

               Conread position:
               18-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 214
               

               Conread position:
               20-297
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 198
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               166, 37
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               166, 197
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               166, 31
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               166, 197
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               60, 191
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               38-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 182
               

               Conread position:
               38-297
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               154, 37
               

               Conread position:
               52-296
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               55-287
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               61, 169
               

               Conread position:
               55-291
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               61, 169
               

               Conread position:
               64-287
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 166
               

               Conread position:
               68-287
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               48, 156
               

               Conread position:
               98-291
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               25, 14
               
Show alignments to all cow chromosomes.