Cow genome map


           Conread name:
           rpfco0123_l11.y1
        

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 165
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               14, 118
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 219
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               13, 224
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               13, 172
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 169
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 232
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               218
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               13, 194
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 107
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               13, 231
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               13, 159
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 118
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               13, 231
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               10, 230
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 218
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 221
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               11, 116
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               11, 207
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 157
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 183
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 91
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               6-287
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               5, 222
               

               Conread position:
               12-291
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               82, 215
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               101, 145
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 210
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               101, 211
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               101, 210
               

               Conread position:
               15-293
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-313
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 86
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               90, 201
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               90, 198
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               90, 199
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 47
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               124, 78
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               166, 86
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 6
               

               Conread position:
               29-292
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               37-287
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               37-287
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               60, 188
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               40-287
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               152, 183
               

               Conread position:
               43-297
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               21, 7
               

               Conread position:
               44-287
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               46-287
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               70, 178
               

               Conread position:
               50-297
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               144, 47
               

               Conread position:
               70-297
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               79-291
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               38, 145
               

               Conread position:
               90-297
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               102, 128
               

               Conread position:
               112-297
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               153
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               80, 106
               

               Conread position:
               132-297
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               121, 79
               
Show alignments to all cow chromosomes.