Cow genome map
| Conread name: | rpfco0123_l11.y1 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:3987492-3987794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:6568670-6568969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 13, 156 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:7137778-7138080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 13, 118 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:8382503-8382201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:10044770-10044477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 13, 165 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:11020222-11019920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:11389050-11389352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:11401884-11401582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:11453303-11453605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 14, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:17387087-17386785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:19712681-19712983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:20215832-20216134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:20581215-20581514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 13, 63 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:21163867-21163565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:22737142-22737444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 13, 231 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:26324636-26324938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:27094023-27094325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:33808870-33809172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:39897499-39897801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:45479524-45479826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:45901429-45901730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 13, 118 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:45976063-45975761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:48882307-48882009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 13, 165 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:53537640-53537338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:55361231-55361533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:56451542-56451833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 13, 93 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:57329842-57329540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:57521739-57521437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:60379727-60379425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:63177607-63177305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-287 | 
| Cow position: | chr6:63714712-63715014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-290 | 
| Cow position: | chr6:16418127-16418423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 13, 118 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:7467087-7467392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 118 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:13307834-13308140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:14929011-14928717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 13, 63 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:17344763-17344456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 12, 231 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:18803495-18803801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:18912171-18912476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 14, 172 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:21712270-21711964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:26667461-26667766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 13, 229 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:37388130-37387824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:43087051-43087340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 13, 80 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:46763842-46764148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:52697155-52696842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 13, 238 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:53542919-53543225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-291 | 
| Cow position: | chr6:67553796-67553490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 13, 230 | 
| Conread position: | 1-294 | 
| Cow position: | chr6:3152776-3152479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 13, 221 | 
| Conread position: | 1-297 | 
| Cow position: | chr6:46283541-46283847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 116 | 
| Conread position: | 1-297 | 
| Cow position: | chr6:54472088-54472394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 11, 149 | 
| Conread position: | 1-297 | 
| Cow position: | chr6:65847809-65848117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 11, 107 | 
| Conread position: | 4-297 | 
| Cow position: | chr6:47574346-47574042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 97 | 
| Conread position: | 6-287 | 
| Cow position: | chr6:58036835-58036543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 215 | 
| Conread position: | 6-291 | 
| Cow position: | chr6:21832106-21832403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 5, 55 | 
| Conread position: | 6-297 | 
| Cow position: | chr6:19103352-19103657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 5, 222 | 
| Conread position: | 7-291 | 
| Cow position: | chr6:17149627-17149909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 76 | 
| Conread position: | 12-291 | 
| Cow position: | chr6:16049746-16050035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 20, 213 | 
| Conread position: | 15-287 | 
| Cow position: | chr6:1245378-1245659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 209 | 
| Conread position: | 15-287 | 
| Cow position: | chr6:12971939-12971658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 101, 209 | 
| Conread position: | 15-287 | 
| Cow position: | chr6:17111623-17111903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 101, 209 | 
| Conread position: | 15-287 | 
| Cow position: | chr6:31912632-31912913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 101, 209 | 
| Conread position: | 15-287 | 
| Cow position: | chr6:45937822-45937541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 101, 204 | 
| Conread position: | 15-291 | 
| Cow position: | chr6:327820-328105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 101, 158 | 
| Conread position: | 15-291 | 
| Cow position: | chr6:11869389-11869676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 16, 205 | 
| Conread position: | 15-291 | 
| Cow position: | chr6:39912865-39912580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 101, 209 | 
| Conread position: | 15-291 | 
| Cow position: | chr6:46225419-46225704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 16, 173 | 
| Conread position: | 15-291 | 
| Cow position: | chr6:63040790-63041071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 101, 208 | 
| Conread position: | 15-292 | 
| Cow position: | chr6:56842566-56842278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 215 | 
| Conread position: | 15-296 | 
| Cow position: | chr6:16625333-16625033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 85, 207 | 
| Conread position: | 15-296 | 
| Cow position: | chr6:24583861-24584145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 100, 44 | 
| Conread position: | 15-297 | 
| Cow position: | chr6:28000853-28001145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 101, 209 | 
| Conread position: | 15-297 | 
| Cow position: | chr6:53461625-53461927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 52 | 
| Conread position: | 21-299 | 
| Cow position: | chr6:32018567-32018865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 54 | 
| Conread position: | 24-297 | 
| Cow position: | chr6:32287088-32286803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 198 | 
| Conread position: | 26-287 | 
| Cow position: | chr6:28184789-28185057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 90, 71 | 
| Conread position: | 26-291 | 
| Cow position: | chr6:55593602-55593328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 90, 199 | 
| Conread position: | 26-297 | 
| Cow position: | chr6:38439142-38438858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 49 | 
| Conread position: | 28-296 | 
| Cow position: | chr6:55474843-55474559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 78, 198 | 
| Conread position: | 37-287 | 
| Cow position: | chr6:42897709-42897449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 60, 191 | 
| Conread position: | 37-291 | 
| Cow position: | chr6:19719088-19718843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 80, 30 | 
| Conread position: | 37-291 | 
| Cow position: | chr6:28102352-28102611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 79, 123 | 
| Conread position: | 37-291 | 
| Cow position: | chr6:54887071-54887334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 13, 34 | 
| Conread position: | 37-300 | 
| Cow position: | chr6:7191107-7191363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 155, 6 | 
| Conread position: | 39-297 | 
| Cow position: | chr6:1498720-1498450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 111 | 
| Conread position: | 40-291 | 
| Cow position: | chr6:20267799-20268056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 76, 27 | 
| Conread position: | 40-291 | 
| Cow position: | chr6:43187627-43187367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 83, 179 | 
| Conread position: | 54-291 | 
| Cow position: | chr6:2618061-2618308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 45, 111 | 
| Conread position: | 56-287 | 
| Cow position: | chr6:508019-508260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 60, 168 | 
| Conread position: | 63-296 | 
| Cow position: | chr6:10612320-10612085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 129, 47 | 
| Conread position: | 66-297 | 
| Cow position: | chr6:52249016-52249262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 53, 107 | 
| Conread position: | 82-287 | 
| Cow position: | chr6:653322-653535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 34, 15 | 
| Conread position: | 94-297 | 
| Cow position: | chr6:3893176-3893390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 98, 9 | 
| Conread position: | 129-297 | 
| Cow position: | chr6:7112510-7112695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
Show alignments to all cow chromosomes.
