Cow genome map

Conread name: rpfco0123_l11.y1

Conread position: 1-287
Cow position: chr7:11460482-11460783 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 13, 54

Conread position: 1-287
Cow position: chr7:12773563-12773261 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 230

Conread position: 1-287
Cow position: chr7:14131764-14131462 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:14539284-14538982 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:18865648-18865346 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:21323917-21323615 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 13, 225

Conread position: 1-287
Cow position: chr7:22598671-22598369 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:24827483-24827181 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:25230685-25230385 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 212

Conread position: 1-287
Cow position: chr7:34229076-34229378 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:40203646-40203348 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 13, 35

Conread position: 1-287
Cow position: chr7:46266817-46266521 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:50961728-50961431 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 73

Conread position: 1-287
Cow position: chr7:54548092-54547791 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 13, 192

Conread position: 1-287
Cow position: chr7:54822766-54823068 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 225

Conread position: 1-287
Cow position: chr7:60279262-60279564 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:62766592-62766290 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr7:65556763-65557064 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 229

Conread position: 1-287
Cow position: chr7:65712302-65712000 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 231

Conread position: 1-287
Cow position: chr7:66298348-66298644 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 230

Conread position: 1-289
Cow position: chr7:19956961-19957265 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-290
Cow position: chr7:66224033-66224329 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 63

Conread position: 1-291
Cow position: chr7:114256-113951 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 227
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 13, 181

Conread position: 1-291
Cow position: chr7:899600-899906 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr7:13806005-13806298 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 11, 118

Conread position: 1-291
Cow position: chr7:21148085-21147781 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 194

Conread position: 1-291
Cow position: chr7:26838068-26837764 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 11, 112

Conread position: 1-291
Cow position: chr7:27552279-27552579 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 80

Conread position: 1-291
Cow position: chr7:27573470-27573167 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 10, 227

Conread position: 1-291
Cow position: chr7:33308588-33308894 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr7:34412868-34413182 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 1-291
Cow position: chr7:34425019-34424715 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 79

Conread position: 1-291
Cow position: chr7:34431171-34431479 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 242

Conread position: 1-291
Cow position: chr7:34819715-34819408 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 13, 232

Conread position: 1-291
Cow position: chr7:37507101-37507406 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 13, 193

Conread position: 1-291
Cow position: chr7:41405103-41405410 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 231

Conread position: 1-291
Cow position: chr7:58138379-58138074 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 217
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-292
Cow position: chr7:28162729-28162422 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 231

Conread position: 1-294
Cow position: chr7:19096646-19096949 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 10, 106

Conread position: 1-295
Cow position: chr7:12659580-12659871 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 47

Conread position: 1-295
Cow position: chr7:65496073-65496374 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 225
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 12, 56

Conread position: 1-296
Cow position: chr7:24797727-24798037 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 43

Conread position: 1-296
Cow position: chr7:56887357-56887666 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 118

Conread position: 1-296
Cow position: chr7:57538408-57538715 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 10, 122

Conread position: 1-297
Cow position: chr7:23276854-23277153 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 85

Conread position: 1-297
Cow position: chr7:27509039-27508726 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 11, 177

Conread position: 1-297
Cow position: chr7:33810079-33809770 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 112

Conread position: 1-297
Cow position: chr7:45928518-45928827 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 10, 92

Conread position: 1-297
Cow position: chr7:47909666-47909977 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 224

Conread position: 1-297
Cow position: chr7:61824423-61824710 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 34

Conread position: 1-297
Cow position: chr7:63947465-63947774 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 118

Conread position: 1-297
Cow position: chr7:64330317-64330017 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 70

Conread position: 1-297
Cow position: chr7:65121783-65121472 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 11, 118

Conread position: 6-292
Cow position: chr7:14081555-14081846 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 163

Conread position: 6-297
Cow position: chr7:68575770-68575484 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 71

Conread position: 7-291
Cow position: chr7:548416-548124 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 109, 78

Conread position: 10-297
Cow position: chr7:62732620-62732318 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 215

Conread position: 12-295
Cow position: chr7:23457377-23457669 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 45

Conread position: 12-297
Cow position: chr7:33392525-33392227 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 27, 101

Conread position: 13-297
Cow position: chr7:23477891-23478185 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 18, 79

Conread position: 14-291
Cow position: chr7:46195546-46195263 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 98, 43

Conread position: 15-287
Cow position: chr7:981961-982241 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 101, 209

Conread position: 15-287
Cow position: chr7:6667135-6666854 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 209

Conread position: 15-287
Cow position: chr7:14098540-14098263 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 101, 144

Conread position: 15-287
Cow position: chr7:37190301-37190020 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 101, 209

Conread position: 15-287
Cow position: chr7:37521110-37520832 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 107, 58

Conread position: 15-287
Cow position: chr7:49602937-49603218 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 209

Conread position: 15-291
Cow position: chr7:7278191-7277906 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 101, 210

Conread position: 15-291
Cow position: chr7:42334762-42334477 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 105, 86

Conread position: 15-291
Cow position: chr7:52761890-52762182 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 216

Conread position: 15-291
Cow position: chr7:61831860-61832145 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 101, 209

Conread position: 15-291
Cow position: chr7:63389627-63389342 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 17, 38

Conread position: 15-293
Cow position: chr7:17269847-17270135 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 209
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 15, 216

Conread position: 15-295
Cow position: chr7:58302550-58302828 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 177, 86

Conread position: 15-296
Cow position: chr7:50940-51235 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 17, 45

Conread position: 15-296
Cow position: chr7:29474066-29473783 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 108

Conread position: 15-297
Cow position: chr7:35743193-35742902 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 109

Conread position: 18-291
Cow position: chr7:27790908-27790632 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 146

Conread position: 26-287
Cow position: chr7:1441215-1441482 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 31

Conread position: 26-288
Cow position: chr7:42593924-42594196 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 194

Conread position: 26-291
Cow position: chr7:34548214-34547941 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 90, 197

Conread position: 26-291
Cow position: chr7:44745228-44745501 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 90, 34

Conread position: 26-292
Cow position: chr7:10450648-10450916 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 166, 79

Conread position: 26-296
Cow position: chr7:45954485-45954226 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 166, 31

Conread position: 26-296
Cow position: chr7:69065879-69065605 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 166, 79

Conread position: 26-297
Cow position: chr7:30306431-30306160 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 81, 115

Conread position: 26-297
Cow position: chr7:49750522-49750241 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 203

Conread position: 29-297
Cow position: chr7:39902964-39902686 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 191

Conread position: 36-291
Cow position: chr7:62991332-62991066 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 50, 150

Conread position: 37-287
Cow position: chr7:12299-12558 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 79, 187

Conread position: 37-291
Cow position: chr7:33335061-33334798 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 196
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 85, 75

Conread position: 45-291
Cow position: chr7:32283285-32283031 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 167

Conread position: 50-297
Cow position: chr7:22792447-22792204 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 199
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 142, 34

Conread position: 70-297
Cow position: chr7:44455492-44455720 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 122, 31

Conread position: 79-296
Cow position: chr7:38145309-38145533 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 148

Conread position: 79-297
Cow position: chr7:34973898-34973673 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 87

Conread position: 84-291
Cow position: chr7:56822156-56822372 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 39, 135

Conread position: 93-296
Cow position: chr7:58335468-58335678 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 99, 91

Conread position: 93-297
Cow position: chr7:49107647-49107848 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 8

Conread position: 93-298
Cow position: chr7:59712801-59712585 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.