Cow genome map


           Conread name:
           rpfco0123_l11.y1
        

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               10, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               13, 225
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 212
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               13, 35
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 192
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               13, 225
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 229
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 231
               

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-289
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-290
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 63
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               13, 181
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 194
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 80
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               10, 227
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               13, 242
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               13, 232
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               13, 193
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               13, 231
               

               Conread position:
               1-291
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               13, 230
               

               Conread position:
               1-292
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 231
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               10, 106
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 43
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               10, 122
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               11, 177
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 224
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               230
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               11, 118
               

               Conread position:
               6-292
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 163
               

               Conread position:
               6-297
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               67, 71
               

               Conread position:
               7-291
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               109, 78
               

               Conread position:
               10-297
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 215
               

               Conread position:
               12-295
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               12-297
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               27, 101
               

               Conread position:
               13-297
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               18, 79
               

               Conread position:
               14-291
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               98, 43
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               101, 144
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               107, 58
               

               Conread position:
               15-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               101, 210
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               105, 86
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 216
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               101, 209
               

               Conread position:
               15-291
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               17, 38
               

               Conread position:
               15-293
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               15, 216
               

               Conread position:
               15-295
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               177, 86
               

               Conread position:
               15-296
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               15-296
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               15-297
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 109
               

               Conread position:
               18-291
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 146
               

               Conread position:
               26-287
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               26-288
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 194
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               90, 197
               

               Conread position:
               26-291
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               26-292
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               26-296
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               166, 31
               

               Conread position:
               26-296
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               81, 115
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 203
               

               Conread position:
               29-297
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 191
               

               Conread position:
               36-291
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               50, 150
               

               Conread position:
               37-287
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               79, 187
               

               Conread position:
               37-291
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               45-291
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 167
               

               Conread position:
               50-297
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               142, 34
               

               Conread position:
               70-297
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               122, 31
               

               Conread position:
               79-296
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               31, 148
               

               Conread position:
               79-297
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               84-291
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 135
               

               Conread position:
               93-296
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               99, 91
               

               Conread position:
               93-297
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 8
               

               Conread position:
               93-298
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               30, 0
               
Show alignments to all cow chromosomes.