Cow genome map

Conread name: rpfco0123_l11.y1

Conread position: 1-287
Cow position: chr8:817316-817019 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 217
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 118

Conread position: 1-287
Cow position: chr8:1508494-1508796 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:4614791-4615093 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:5195952-5195650 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:6464309-6464611 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 13, 73

Conread position: 1-287
Cow position: chr8:6588194-6588496 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:7051009-7051311 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:9739361-9739059 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:11241151-11240849 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:16194958-16194656 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 14, 230

Conread position: 1-287
Cow position: chr8:21043433-21043130 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 13, 231

Conread position: 1-287
Cow position: chr8:25065760-25065458 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:25614112-25613810 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:30489059-30489361 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 231

Conread position: 1-287
Cow position: chr8:33045163-33045465 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:39141484-39141182 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:40584908-40584606 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:42317429-42317731 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:49964083-49964385 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:50799983-50800285 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:51019319-51019621 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:53120298-53120600 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:54015655-54015353 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:54479362-54479060 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 230

Conread position: 1-287
Cow position: chr8:55270688-55270990 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 13, 230

Conread position: 1-290
Cow position: chr8:27551842-27552147 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr8:3957018-3956713 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr8:4727790-4728095 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 147

Conread position: 1-291
Cow position: chr8:7682188-7682494 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 10, 54

Conread position: 1-291
Cow position: chr8:8227568-8227867 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 54

Conread position: 1-291
Cow position: chr8:14258915-14258617 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 231

Conread position: 1-291
Cow position: chr8:17434541-17434235 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr8:24724635-24724329 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr8:28880238-28879933 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 229

Conread position: 1-291
Cow position: chr8:32042628-32042323 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 169

Conread position: 1-291
Cow position: chr8:35127959-35128261 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 14, 114

Conread position: 1-291
Cow position: chr8:35291388-35291694 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 13, 231

Conread position: 1-291
Cow position: chr8:46645082-46645387 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 14, 192

Conread position: 1-291
Cow position: chr8:46655414-46655111 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 11, 69

Conread position: 1-291
Cow position: chr8:46953517-46953211 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr8:46961859-46961553 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 223
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 13, 230

Conread position: 1-291
Cow position: chr8:50315716-50316012 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 226
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 11, 176

Conread position: 1-291
Cow position: chr8:53450885-53450578 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 231

Conread position: 1-291
Cow position: chr8:60769563-60769869 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 224
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 13, 230

Conread position: 1-292
Cow position: chr8:38573834-38574134 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 218
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 11, 235

Conread position: 1-293
Cow position: chr8:18656896-18657204 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 219
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 13, 118

Conread position: 1-297
Cow position: chr8:57055780-57056086 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 2-297
Cow position: chr8:11781784-11781458 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 47

Conread position: 9-287
Cow position: chr8:12077984-12078271 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 107, 215

Conread position: 9-293
Cow position: chr8:51061314-51061612 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 211

Conread position: 9-296
Cow position: chr8:43477364-43477065 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 205

Conread position: 12-287
Cow position: chr8:8382220-8381936 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 104, 212

Conread position: 12-287
Cow position: chr8:22531404-22531688 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 104, 212

Conread position: 12-291
Cow position: chr8:45976-45688 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 206
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 104, 212

Conread position: 12-291
Cow position: chr8:8469100-8468808 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 37, 179

Conread position: 12-291
Cow position: chr8:12795209-12794922 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 214

Conread position: 12-292
Cow position: chr8:45491964-45491685 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 135

Conread position: 12-293
Cow position: chr8:45791916-45792197 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 181

Conread position: 12-297
Cow position: chr8:32966942-32966650 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 100

Conread position: 13-291
Cow position: chr8:21152494-21152763 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 15, 47

Conread position: 14-297
Cow position: chr8:18080777-18080491 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 36

Conread position: 14-297
Cow position: chr8:24868399-24868688 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 101

Conread position: 15-287
Cow position: chr8:6061664-6061941 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 101, 148

Conread position: 15-287
Cow position: chr8:7427100-7427381 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 209

Conread position: 15-287
Cow position: chr8:8652537-8652818 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 209

Conread position: 15-287
Cow position: chr8:41658992-41659274 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 82, 98

Conread position: 15-290
Cow position: chr8:50430325-50430608 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 101, 82

Conread position: 15-291
Cow position: chr8:1500133-1500418 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 101, 209

Conread position: 15-291
Cow position: chr8:16940156-16940436 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 188

Conread position: 15-292
Cow position: chr8:26879357-26879071 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 101, 209

Conread position: 15-292
Cow position: chr8:41641428-41641708 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 110, 30

Conread position: 15-293
Cow position: chr8:8821045-8820768 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 166

Conread position: 15-297
Cow position: chr8:983082-982789 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 35

Conread position: 15-297
Cow position: chr8:8387353-8387068 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 217
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 177, 30

Conread position: 15-297
Cow position: chr8:35211789-35212073 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 42

Conread position: 26-287
Cow position: chr8:21090523-21090793 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 198

Conread position: 26-289
Cow position: chr8:51882249-51882517 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 47

Conread position: 26-291
Cow position: chr8:8514270-8514543 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 90, 193

Conread position: 26-291
Cow position: chr8:30158489-30158217 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 90, 34

Conread position: 26-291
Cow position: chr8:47751339-47751610 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 31

Conread position: 26-297
Cow position: chr8:17912622-17912894 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 88

Conread position: 26-297
Cow position: chr8:50948802-50949089 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 123

Conread position: 31-295
Cow position: chr8:15570077-15570345 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 65, 194

Conread position: 32-297
Cow position: chr8:4923700-4923435 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 160, 66

Conread position: 36-291
Cow position: chr8:26014062-26013806 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 195
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 156, 74

Conread position: 37-290
Cow position: chr8:24193330-24193072 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 79, 133

Conread position: 37-291
Cow position: chr8:14302494-14302231 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 79, 187

Conread position: 44-291
Cow position: chr8:32628225-32628482 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 181

Conread position: 50-297
Cow position: chr8:45690828-45691075 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 144, 61

Conread position: 57-287
Cow position: chr8:18402544-18402783 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 162

Conread position: 76-293
Cow position: chr8:38710556-38710779 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 88

Conread position: 88-291
Cow position: chr8:42427850-42428059 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 90

Conread position: 105-297
Cow position: chr8:60744887-60745084 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 73

Conread position: 106-296
Cow position: chr8:5243717-5243913 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 110

Conread position: 120-297
Cow position: chr8:39165691-39165875 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 104

Show alignments to all cow chromosomes.