Cow genome map


           Conread name:
           rpfco0129_n4.y1
        

               Conread position:
               3-503
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 199
               

               Conread position:
               4-492
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               4-503
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               4-503
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               5-377
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               153, 57
               

               Conread position:
               5-486
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 64
               

               Conread position:
               5-491
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               5-503
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 63
               

               Conread position:
               6-488
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 38
               

               Conread position:
               8-447
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               8-450
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 61
               

               Conread position:
               8-482
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               334
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 62
               

               Conread position:
               8-494
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 61
               

               Conread position:
               8-503
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               9-293
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               130, 59
               

               Conread position:
               10-498
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 22
               

               Conread position:
               13-437
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 8
               

               Conread position:
               13-490
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               14-491
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               174, 24
               

               Conread position:
               15-426
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               17, 55
               

               Conread position:
               16-503
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               20-424
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               14, 52
               

               Conread position:
               22-390
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 54
               

               Conread position:
               26-297
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               160, 43
               

               Conread position:
               31-489
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 38
               

               Conread position:
               35-484
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               102, 37
               

               Conread position:
               38-503
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 31
               

               Conread position:
               55-361
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               73, 18
               

               Conread position:
               66-503
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 60
               

               Conread position:
               69-500
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 99
               

               Conread position:
               75-486
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               385, 51
               

               Conread position:
               82-501
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 87
               

               Conread position:
               99-428
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               108-411
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               114-317
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               74, 26
               

               Conread position:
               117-501
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               70, 273
               

               Conread position:
               134-489
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 24
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 61
               

               Conread position:
               135-501
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 315
               

               Conread position:
               135-503
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               136-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               52, 125
               

               Conread position:
               137-495
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               140-356
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               142-495
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               142-503
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 95
               

               Conread position:
               145-361
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               43, 92
               

               Conread position:
               148-491
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               40, 163
               

               Conread position:
               149-486
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 176
               

               Conread position:
               150-502
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 49
               

               Conread position:
               153-489
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               35, 15
               

               Conread position:
               154-482
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               32, 139
               

               Conread position:
               160-489
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 168
               

               Conread position:
               168-450
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               19, 180
               

               Conread position:
               168-466
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               20, 8
               

               Conread position:
               170-497
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 128
               

               Conread position:
               172-485
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               24, 121
               

               Conread position:
               186-427
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               186-503
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 156
               

               Conread position:
               187-487
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 44
               

               Conread position:
               196-501
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               72, 126
               

               Conread position:
               200-446
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               211-503
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               25, 145
               

               Conread position:
               212-395
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 166
               

               Conread position:
               214-503
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               217-424
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               217-503
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               219-503
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               269-500
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               269-503
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               272-491
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               40, 62
               

               Conread position:
               279-503
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               25, 41
               

               Conread position:
               281-503
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               295-493
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               336-486
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               141, 28
               

               Conread position:
               336-503
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 112
               

               Conread position:
               337-480
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               86, 116
               

               Conread position:
               337-501
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               89, 24
               

               Conread position:
               337-502
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               337-503
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               156, 50
               

               Conread position:
               338-491
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               340-503
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               351-503
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               364-503
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               368-474
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               373-503
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               374-503
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               383-501
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-503
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               394-503
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               398-501
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.